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XROOTD-L  October 2009

XROOTD-L October 2009

Subject:

Re: XrdCnsd problem in slc5 with version xrootd-20090623

From:

Andrew Hanushevsky <[log in to unmask]>

Date:

13 Oct 2009 10:15:15 -0700 (PDT)Tue, 13 Oct 2009 10:15:15 -0700 (PDT)

Content-Type:

MULTIPART/MIXED

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TEXT/PLAIN (340 lines)

Hi Wen,

I assume that you started xrootd with the -d option as the XrdCnsd is 
producing a full trace. Yes?

The only "problem" here that I see is that it claims it lost the 
connection to the xrootd server. Did you kill the server or restart it at
091009 22:23:31?

Andy

On Tue, 13 Oct 2009, wen guan wrote:

> Hi Andrew,
>
>       When using xrootd-20090904, XrdCnsd still has some problem.
> Sometimes(2 times in 3 days are found) xrdcnsd prints some errors
> below and then no response.
> (*)
> 091009 21:20:07 15685 XrdCnsdoEvents: Event:
> 'haifeng.32505:22@pcuwsun30 create 664
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/DUMP/DUM.000908._00570005.pool.root.4?'
> 091009 21:20:07 15685 XrdCnsXeq:  thread started
> 091009 21:20:07 15685 XrdCnsdoEvents: Event:
> 'haifeng.32505:22@pcuwsun30 closew
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/DUMP/DUM.000908._00570005.pool.root.4
> 12317450'
> 091009 21:29:52 15685 XrdCnsdoEvents: Event:
> 'haifeng.6132:20@pcuwsun20 create 664
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/AOD/AOD.000908._00570003.pool.root.4?'
> 091009 21:29:52 15685 XrdCnsXeq:  thread started
> 091009 21:29:52 15685 XrdCnsdoEvents: Event:
> 'haifeng.6132:20@pcuwsun20 closew
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/AOD/AOD.000908._00570003.pool.root.4
> 47660354'
> 091009 21:32:07 15685 XrdCnsSched: running underused thread monitor inq=0
> 091009 21:32:07 15685 XrdCnsSched: 2 threads; 1 idle
> 091009 21:32:07 15685 XrdCnsSched: scheduling underused thread monitor
> in 780 seconds
> 091009 21:33:03 15685 XrdCnsdoEvents: Event:
> 'haifeng.11089:22@pcuwsun22 create 664
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/DUMP/DUM.000908._00530003.pool.root.4?'
> 091009 21:33:03 15685 XrdCnsdoEvents: Event:
> 'haifeng.11089:22@pcuwsun22 closew
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/DUMP/DUM.000908._00530003.pool.root.4
> 12482563'
> 091009 21:37:25 15685 XrdCnsdoEvents: Event:
> 'haifeng.11685:20@pcuwsun22 create 664
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/LOG/sim.000908._00560015.log.4?'
> 091009 21:37:25 15685 XrdCnsdoEvents: Event:
> 'haifeng.11685:20@pcuwsun22 closew
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/LOG/sim.000908._00560015.log.4
> 4568199'
> 091009 21:45:07 15685 XrdCnsSched: running underused thread monitor inq=0
> 091009 21:45:07 15685 XrdCnsSched: 2 threads; 1 idle
> 091009 21:45:07 15685 XrdCnsSched: scheduling underused thread monitor
> in 780 seconds
> 091009 21:54:13 15685 XrdCnsdoEvents: Event:
> 'haifeng.11106:22@pcuwsun31 create 664
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/DUMP/DUM.000908._00550005.pool.root.4?'
> 091009 21:54:13 15685 XrdCnsXeq:  thread started
> 091009 21:54:13 15685 XrdCnsdoEvents: Event:
> 'haifeng.11106:22@pcuwsun31 closew
> /xrootd/users/russlan/mc_112911_ttbar_mcnlo_10TeV_ee.e111_a86_dmp95_tid000908/DUMP/DUM.000908._00550005.pool.root.4
> 12460586'
> 091009 21:58:07 15685 XrdCnsSched: running underused thread monitor inq=0
> 091009 21:58:07 15685 XrdCnsSched: 2 threads; 1 idle
> 091009 21:58:07 15685 XrdCnsSched: scheduling underused thread monitor
> in 780 seconds
> 091009 22:11:07 15685 XrdCnsSched: running underused thread monitor inq=0
> 091009 22:11:07 15685 XrdCnsSched: 2 threads; 1 idle
> 091009 22:11:07 15685 XrdCnsSched: scheduling underused thread monitor
> in 780 seconds
> 091009 22:23:31 15685 XrdCnsdoEvents: Event: ''
> 091009 22:23:31 15685 XrdCnsdoEvents: traceid missing in event ?
> 091009 22:23:31 15685 XrdCnsdoEvents: Exiting; lost event connection to xrootd!
>
>
> Wen
>
> On Sun, Oct 11, 2009 at 4:23 PM, Andrew Hanushevsky
> <[log in to unmask]> wrote:
>> Hi Wen,
>>
>> Could be but I will ask the client developer about it. For now, let's let it
>> run idle for a while and hen see if it gets itself into that state.
>>
>> Andy
>>
>> On Sat, 10 Oct 2009, wen guan wrote:
>>
>>> Hi andrew,
>>>
>>>    I only found it happened in slc5 machines with version
>>> xrootd-20090623(x86_64_linux_26,g++ (GCC) 3.4.6 20060404 (Red Hat
>>> 3.4.6-9) binary version) . Sometimes I even cannot kill "XrdCnsd" with
>>> "Kill" command. I need to use "Kill -9 " to kill it.
>>> Last night I downloaded xrootd-20090904 src version and compiled it
>>> locally.  Until now I haven't found this problem again.  Maybe the
>>> problem is related to gcc.
>>>
>>> Thanks
>>> Wen
>>>
>>> On Sat, Oct 10, 2009 at 3:17 AM, Andrew Hanushevsky
>>> <[log in to unmask]> wrote:
>>>>
>>>> Hi Wen,
>>>>
>>>> OK. Does this only happen in SLC5 or does it happen in all kernels.
>>>>
>>>> Andy
>>>>
>>>> On Fri, 9 Oct 2009, wen guan wrote:
>>>>
>>>>> Hi Andrew,
>>>>>
>>>>>        For newly started XrdCnsd, when doing a xrdcp, the
>>>>> disappeared "poll" thread will appear again and an shadow will be
>>>>> created in cns server. But for old Xrdcnsd, when doing xrdcp, no
>>>>> "poll" thread will be started. no shadow will be created in cns
>>>>> server.
>>>>>
>>>>> Wen
>>>>>
>>>>> On Fri, Oct 9, 2009 at 12:58 AM, Andrew Hanushevsky <[log in to unmask]>
>>>>> wrote:
>>>>>>
>>>>>> Hi Wen,
>>>>>>
>>>>>> I guess I don't understand the actual problem. When you say 'not
>>>>>> respond"
>>>>>> what do you actually see to come to that conclusion. As for the
>>>>>> analysis,
>>>>>> and stack traces, these are all perfectly normal. The "poll" thread
>>>>>> need
>>>>>> not
>>>>>> exist at all times and, in fact, will disappear after a long period of
>>>>>> inactivity. I will look some more but I need to know what "no response"
>>>>>> appears like.
>>>>>>
>>>>>> Andy
>>>>>>
>>>>>> ----- Original Message ----- From: "wen guan" <[log in to unmask]>
>>>>>> To: <[log in to unmask]>
>>>>>> Sent: Tuesday, October 06, 2009 12:46 PM
>>>>>> Subject: XrdCnsd problem in slc5 with version xrootd-20090623
>>>>>>
>>>>>>
>>>>>>> Hi,
>>>>>>>
>>>>>>>     The XrdCnsd in xrootd-20090623 failed to create cns frequestly.
>>>>>>> When starting XrdCnsd, it works fine. But when trying it next day, it
>>>>>>> will not response. Below is the test result.
>>>>>>>
>>>>>>> It seems the "poll" thread cannot be started for old XrdCnsd(started
>>>>>>> more than one day and there is no active in long time(maybe 780s)).
>>>>>>> For (*), Process 10816 was an old XrdCnsd(started more than one day)
>>>>>>> process which didn't response. After killed it, a new process 13665
>>>>>>> was created which worked fine.  From here we can see process 13665 had
>>>>>>> a thread "poll"(thread 2) but process 10816 didn't have it.
>>>>>>> For (**),  When there was no files copied to xrootd for 10 minutes,
>>>>>>> the "poll" thread in Process 13665  disappeared. But when I did a
>>>>>>> xrdcp to this server. We will saw this "poll" thread again. But for
>>>>>>> process which has on active for long time, the "poll" thread cannot be
>>>>>>> restart again.
>>>>>>>
>>>>>>> (*)
>>>>>>> [root@pcuwdata12 ~]# ps -ef|grep xrootd-2
>>>>>>> xrootd   10798     1  0 Oct02 ?        00:21:21
>>>>>>> /opt/xrootd-20090623/bin//xrootd -b -d -R xrootd -l
>>>>>>> /tmp/log/xrootd/xrd.log -c /opt/xrootd-20090623/conf/xrdcluster.cfg
>>>>>>> xrootd   10809     1  0 Oct02 ?        00:00:05
>>>>>>> /opt/xrootd-20090623/bin//cmsd -b -d -R xrootd -l
>>>>>>> /tmp/log/xrootd/cms.log -c /opt/xrootd-20090623/conf/xrdcluster.cfg
>>>>>>> xrootd   10816 10798  0 Oct02 ?        00:00:00
>>>>>>> /opt/xrootd-20090623/bin/XrdCnsd -d -l /tmp/log/xrootd/cnsd.log
>>>>>>> root://pcuwsun04.cern.ch:1095
>>>>>>> root     13452 13340  0 20:59 pts/1    00:00:00 grep xrootd-2
>>>>>>> [root@pcuwdata12 ~]# pstack 10816
>>>>>>> Thread 7 (Thread 0x410cf940 (LWP 10826)):
>>>>>>> #0  0x000000370e40ae00 in pthread_cond_timedwait@@GLIBC_2.3.2 ()
>>>>>>> #1  0x0000000000479707 in XrdSysCondVar::Wait ()
>>>>>>> #2  0x000000000047b8e9 in XrdScheduler::TimeSched ()
>>>>>>> #3  0x000000000047a21d in XrdStartTSched ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 6 (Thread 0x416ed940 (LWP 10827)):
>>>>>>> #0  0x000000370e40c9b1 in sem_wait () from /lib64/libpthread.so.0
>>>>>>> #1  0x000000000041ffb7 in XrdSysSemaphore::Wait ()
>>>>>>> #2  0x000000000047ae11 in XrdScheduler::Run ()
>>>>>>> #3  0x000000000047a241 in XrdStartWorking ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 5 (Thread 0x417ee940 (LWP 10828)):
>>>>>>> #0  0x000000370e40c9b1 in sem_wait () from /lib64/libpthread.so.0
>>>>>>> #1  0x000000000041ffb7 in XrdSysSemaphore::Wait ()
>>>>>>> #2  0x000000000047ae11 in XrdScheduler::Run ()
>>>>>>> #3  0x000000000047a241 in XrdStartWorking ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 4 (Thread 0x418ef940 (LWP 10834)):
>>>>>>> #0  0x000000370e40d5cb in read () from /lib64/libpthread.so.0
>>>>>>> #1  0x00000000004736b9 in XrdOucStream::GetLine ()
>>>>>>> #2  0x000000000041eb06 in XrdCnsDaemon::getEvents ()
>>>>>>> #3  0x000000000041dcfc in CnsEvents ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 3 (Thread 0x419f0940 (LWP 10835)):
>>>>>>> #0  0x000000370e40d174 in __lll_lock_wait () from
>>>>>>> /lib64/libpthread.so.0
>>>>>>> #1  0x000000370e408aca in _L_lock_1034 () from /lib64/libpthread.so.0
>>>>>>> #2  0x000000370e40898c in pthread_mutex_lock () from
>>>>>>> /lib64/libpthread.so.0
>>>>>>> #3  0x000000000041ff5b in XrdSysMutex::Lock ()
>>>>>>> #4  0x000000000041f6d4 in XrdCnsEvent::Queue ()
>>>>>>> #5  0x000000000041ee43 in XrdCnsDaemon::getEvents ()
>>>>>>> #6  0x000000000041dcfc in CnsEvents ()
>>>>>>> #7  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #8  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #9  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 2 (Thread 0x41af1940 (LWP 11659)):
>>>>>>> #0  0x000000370d89a0b1 in nanosleep () from /lib64/libc.so.6
>>>>>>> #1  0x000000370d899ed4 in sleep () from /lib64/libc.so.6
>>>>>>> #2  0x000000000044117a in GarbageCollectorThread ()
>>>>>>> #3  0x000000000045413a in XrdClientThreadDispatcher ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 1 (Thread 0x2b53e8698db0 (LWP 10816)):
>>>>>>> #0  0x000000370e40c9b1 in sem_wait () from /lib64/libpthread.so.0
>>>>>>> #1  0x000000000041ffb7 in XrdSysSemaphore::Wait ()
>>>>>>> #2  0x000000000041f8bd in XrdCnsEvent::Remove ()
>>>>>>> #3  0x000000000041ea05 in XrdCnsDaemon::doRequests ()
>>>>>>> #4  0x00000000004202d1 in main ()
>>>>>>> [root@pcuwdata12 ~]# kill 10816
>>>>>>> [root@pcuwdata12 ~]# kill 10816
>>>>>>> -bash: kill: (10816) - No such process
>>>>>>> [root@pcuwdata12 ~]# ps -ef|grep xrootd-2
>>>>>>> xrootd   10798     1  0 Oct02 ?        00:21:21
>>>>>>> /opt/xrootd-20090623/bin//xrootd -b -d -R xrootd -l
>>>>>>> /tmp/log/xrootd/xrd.log -c /opt/xrootd-20090623/conf/xrdcluster.cfg
>>>>>>> xrootd   10809     1  0 Oct02 ?        00:00:05
>>>>>>> /opt/xrootd-20090623/bin//cmsd -b -d -R xrootd -l
>>>>>>> /tmp/log/xrootd/cms.log -c /opt/xrootd-20090623/conf/xrdcluster.cfg
>>>>>>> xrootd   13665 10798  0 21:03 ?        00:00:00
>>>>>>> /opt/xrootd-20090623/bin/XrdCnsd -d -l /tmp/log/xrootd/cnsd.log
>>>>>>> root://pcuwsun04.cern.ch:1095
>>>>>>> root     13678 13340  0 21:03 pts/1    00:00:00 grep xrootd-2
>>>>>>> [root@pcuwdata12 ~]# pstack 13665
>>>>>>> Thread 8 (Thread 0x4074b940 (LWP 13666)):
>>>>>>> #0  0x000000370e40ae00 in pthread_cond_timedwait@@GLIBC_2.3.2 ()
>>>>>>> #1  0x0000000000479707 in XrdSysCondVar::Wait ()
>>>>>>> #2  0x000000000047b8e9 in XrdScheduler::TimeSched ()
>>>>>>> #3  0x000000000047a21d in XrdStartTSched ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 7 (Thread 0x41b0f940 (LWP 13667)):
>>>>>>> #0  0x000000370e40c9b1 in sem_wait () from /lib64/libpthread.so.0
>>>>>>> #1  0x000000000041ffb7 in XrdSysSemaphore::Wait ()
>>>>>>> #2  0x000000000047ae11 in XrdScheduler::Run ()
>>>>>>> #3  0x000000000047a241 in XrdStartWorking ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 6 (Thread 0x41d8c940 (LWP 13668)):
>>>>>>> #0  0x000000370e40c9b1 in sem_wait () from /lib64/libpthread.so.0
>>>>>>> #1  0x000000000041ffb7 in XrdSysSemaphore::Wait ()
>>>>>>> #2  0x000000000047ae11 in XrdScheduler::Run ()
>>>>>>> #3  0x000000000047a241 in XrdStartWorking ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 5 (Thread 0x41e8d940 (LWP 13669)):
>>>>>>> #0  0x000000370e40d5cb in read () from /lib64/libpthread.so.0
>>>>>>> #1  0x00000000004736b9 in XrdOucStream::GetLine ()
>>>>>>> #2  0x000000000041eb06 in XrdCnsDaemon::getEvents ()
>>>>>>> #3  0x000000000041dcfc in CnsEvents ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 4 (Thread 0x41f8e940 (LWP 13670)):
>>>>>>> #0  0x000000370e40d5cb in read () from /lib64/libpthread.so.0
>>>>>>> #1  0x00000000004736b9 in XrdOucStream::GetLine ()
>>>>>>> #2  0x000000000041eb06 in XrdCnsDaemon::getEvents ()
>>>>>>> #3  0x000000000041dcfc in CnsEvents ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 3 (Thread 0x4208f940 (LWP 13671)):
>>>>>>> #0  0x000000370d89a0b1 in nanosleep () from /lib64/libc.so.6
>>>>>>> #1  0x000000370d899ed4 in sleep () from /lib64/libc.so.6
>>>>>>> #2  0x000000000044117a in GarbageCollectorThread ()
>>>>>>> #3  0x000000000045413a in XrdClientThreadDispatcher ()
>>>>>>> #4  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #5  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #6  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 2 (Thread 0x41279940 (LWP 13672)):
>>>>>>> #0  0x000000370d8cae46 in poll () from /lib64/libc.so.6
>>>>>>> #1  0x000000000046b945 in XrdClientSock::RecvRaw ()
>>>>>>> #2  0x000000000044e08c in XrdClientPhyConnection::ReadRaw ()
>>>>>>> #3  0x000000000044ac3e in XrdClientMessage::ReadRaw ()
>>>>>>> #4  0x000000000044e84c in XrdClientPhyConnection::BuildMessage ()
>>>>>>> #5  0x000000000044b730 in SocketReaderThread ()
>>>>>>> #6  0x000000000045413a in XrdClientThreadDispatcher ()
>>>>>>> #7  0x0000000000479637 in XrdSysThread_Xeq ()
>>>>>>> #8  0x000000370e4064a7 in start_thread () from /lib64/libpthread.so.0
>>>>>>> #9  0x000000370d8d3c2d in clone () from /lib64/libc.so.6
>>>>>>> Thread 1 (Thread 0x2b06bb478db0 (LWP 13665)):
>>>>>>> #0  0x000000370e40c9b1 in sem_wait () from /lib64/libpthread.so.0
>>>>>>> #1  0x000000000041ffb7 in XrdSysSemaphore::Wait ()
>>>>>>> #2  0x000000000041f8bd in XrdCnsEvent::Remove ()
>>>>>>> #3  0x000000000041ea05 in XrdCnsDaemon::doRequests ()
>>>>>>> #4  0x00000000004202d1 in main ()
>>>>>>> [root@pcuwdata12 ~]#
>>>>>>> [root@pcuwdata12 ~]#
>>>>>>>
>>>>>>>
>>>>>>> (***) cnsd.log
>>>>>>> 091006 20:56:10 1828 XrdCnsSched: running underused thread monitor
>>>>>>> inq=0
>>>>>>> 091006 20:56:10 1828 XrdCnsSched: 2 threads; 1 idle
>>>>>>> 091006 20:56:10 1828 XrdCnsSched: scheduling underused thread monitor
>>>>>>> in 780 seconds
>>>>>>>
>>>>>>>
>>>>>>> Thanks
>>>>>>> Wen
>>>>>>>
>>>>>>
>>>>>>
>>>>
>>
>

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