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QSERV-L  May 2014

QSERV-L May 2014

Subject:

new install troubles - "Product python system not found"

From:

Jacek Becla <[log in to unmask]>

Reply-To:

General discussion for qserv (LSST prototype baseline catalog)

Date:

Fri, 23 May 2014 12:41:50 -0700

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (205 lines)

Fabrice

I am blocked, help needed!


Yesterday I had troubles with missing db 1.0. I thought I got that
fixed by doing full reinstall, but that very same setup that was working 
  yesterday is showing the same symptoms now (unless I am
really misremembering!)


source eups/bin/setups.sh
[becla@lsst-dbdev5 2]$ cd qserv
[becla@lsst-dbdev5 qserv]$ setup -r .
setup: in file /usr/local/home/becla/qserv/2/qserv/ups/qserv.table: 
Product db not found
[becla@lsst-dbdev5 qserv]$ eups list
anaconda              1.8.0      	b4 Winter2014 current b5 b6 b3
antlr                 master-gc05368a54f 	b66 b65 b64 b54 b55 current
db                    master-ge313c26491+1 	b66 b65 b64
expat                 master-g4a0254e0b2 	b45 b44 b43 b65 b64 b54 b55 b66
kazoo                 master-g89c833ba84 	b45 b44 b43 b65 b64 b54 b55 b66
libevent              master-g410bd5abbb 	b45 b44 b43 b65 b64 b54 b55 b66
lsst                  8.0.0.2    	Winter2014 b5 b6 current
lua                   master-g8b632a67b3 	b45 b44 b43 b65 b64 b54 b55 b66
luaexpat              master-g2b41498235 	b45 b44 b43 b65 b64 b54 b55 b66
luasocket             master-g59c9a137eb 	b45 b44 b43 b65 b64 b54 b55 b66
luaxmlrpc             master-g1bdc2373fb 	b45 b44 b43 b65 b64 b54 b55 b66
mysql                 master-g5d79af2a50 	b45 b44 b43 b65 b64 b54 b55 b66
mysqlclient           5.1.65+3   	b45 b44 b66 b65 b64 b54 b55 current b43
mysqlproxy            master-g92bb7f6106 	b45 b44 b43 b65 b64 b54 b55 b66
mysqlpython           1.2.3+8    	b45 b44 b43 b65 b64 b54 b55 b66
protobuf              master-g832d498170 	b45 b44 b43 b65 b64 b54 b55 b66
qserv                 tickets.DM-699-gdb91c11a52 	current b66
qserv_testdata        master-gac0d805e98 	current b69
scons                 2.1.0+8    	b45 b44 b58 b66 b65 b64 b51 b54 b55 b43
sconsUtils            master-gcd8b8033a7 	b66 b65 b64
twisted               master-gb8024db1dc 	b45 b44 b43 b65 b64 b54 b55 b66
xrootd                master-gfc9bfb2059 	b45 b44 b43 b65 b64 b54 b55 b66
zookeeper             master-gc48457902f 	b45 b44 b43 b65 b64 b54 b55 b66
zopeinterface         master-g9b9798ca42 	b45 b44 b43 b65 b64 b54 b55 b66

--------------

Unfortunately, installing things from scratch looks broken too:



[becla@lsst-dbdev5 qserv]$ mkdir 3
[becla@lsst-dbdev5 qserv]$ cd 3
[becla@lsst-dbdev5 3]$ wget http://sw.lsstcorp.org/eupspkg/newinstall.sh
--2014-05-23 14:26:58--  http://sw.lsstcorp.org/eupspkg/newinstall.sh
Resolving sw.lsstcorp.org... 141.142.225.137
Connecting to sw.lsstcorp.org|141.142.225.137|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 6430 (6.3K) [application/x-sh]
Saving to: “newinstall.sh”

100%[===================================================================================>] 
6,430       --.-K/s   in 0s

2014-05-23 14:26:58 (395 MB/s) - “newinstall.sh” saved [6430/6430]

[becla@lsst-dbdev5 3]$ bash newinstall.sh

LSST Software Stack Builder
=======================================================================

Detected git version 1.7.1.

The git version control system is frequently used with LSST software. While
the LSST stack should build and work even in the absence of git, we don't
regularly run and test it in such environments. We therefore recommend you
have at least git 1.8.4 installed, or let this script install it for you.

git installed by this installer will be managed by LSST's EUPS package 
manager,
and will not replace or modify any other version of git you may have 
installed
on your system.

Would you like us to install git for you (if unsure, say yes)? yes


In addition to Python 2.7, some LSST packages depend on recent versions 
of numpy,
matplotlib, and scipy. If you don't have all of these, the installation 
may fail.
Using the Anaconda Python distribution will ensure all these are set up.

Anaconda Python installed by this installer will be managed by LSST's EUPS
package manager, and will not replace or modify your system python.

Would you like us to install Anaconda Python distribution (if unsure, 
say yes)? yes

Installing EUPS (v1.3.0)...  done.
Installing git ...
   [  1/1  ]  git 1.8.5.2 ...Unable to find git 1.8.5.2 although it is 
seen in the environment
   [  1/1  ]  git 1.8.5.2 
  done.
Installing Anaconda Python Distribution ...
   [  1/1  ]  anaconda 1.8.0 (already installed) 
  done.
Installing the basic environment ...
   [  1/5  ]  doxygen 1.8.2+2 
  done.
   [  2/5  ]  python 0.0.1 ...
              Using externally provided Python 2.7.5 :: Anaconda 1.8.0 
(64-bit).
   [  2/5  ]  python 0.0.1 
  done.
   [  3/5  ]  scons 2.1.0+7 
  done.
   [  4/5  ]  sconsUtils 8.0.0.0 
  done.
   [  5/5  ]  lsst 8.0.0.2 (already installed) 
  done.
Creating startup scripts (sh) ...  done.
Creating startup scripts (csh) ...  done.
Creating startup scripts (ksh) ...  done.

Bootstrap complete. To continue installing (and to use) the LSST stack
type one of:

     source "/usr/local/home/becla/qserv/3/loadLSST.sh"    # for bash
     source "/usr/local/home/becla/qserv/3/loadLSST.csh"   # for csh
     source "/usr/local/home/becla/qserv/3/loadLSST.ksh"   # for ksh

Individual LSST packages may now be installed with the usual `eups
distrib install' command.  For example, to install the science pipeline
elements of the LSST stack, use:

     eups distrib install lsst_apps

Next, read the documentation at:

     https://confluence.lsstcorp.org/display/LSWUG/LSST+Software+User+Guide

and feel free to ask any questions via our mailing list at:

     http://listserv.lsstcorp.org/mailman/listinfo/lsst-dm-stack-users

                                    Thanks!
                                            -- The LSST Software Teams

[becla@lsst-dbdev5 3]$ source loadLSST.sh
setup: in file 
/usr/local/home/becla/qserv/2/ups_db/Linux64/lsst/8.0.0.2/ups/lsst.table: Product 
python system not found
[becla@lsst-dbdev5 3]$ source /usr/local/home/becla/qserv/3/loadLSST.sh
setup: in file 
/usr/local/home/becla/qserv/2/ups_db/Linux64/lsst/8.0.0.2/ups/lsst.table: Product 
python system not found
[becla@lsst-dbdev5 3]$ eups list
anaconda              1.8.0      	b4 Winter2014 current b5 b6 b3 setup
antlr                 master-gc05368a54f 	b66 b65 b64 b54 b55 current
db                    master-ge313c26491+1 	b66 b65 b64
doxygen               1.8.2+2    	sims b4 Winter2014 current b5 b6 b3
expat                 master-g4a0254e0b2 	b45 b44 b43 b65 b64 b54 b55 b66
git                   1.8.5.2    	current Winter2014 b4 b5 b6 b3 setup
kazoo                 master-g89c833ba84 	b45 b44 b43 b65 b64 b54 b55 b66
libevent              master-g410bd5abbb 	b45 b44 b43 b65 b64 b54 b55 b66
lsst                  8.0.0.2    	Winter2014 b5 b6 current
lua                   master-g8b632a67b3 	b45 b44 b43 b65 b64 b54 b55 b66
luaexpat              master-g2b41498235 	b45 b44 b43 b65 b64 b54 b55 b66
luasocket             master-g59c9a137eb 	b45 b44 b43 b65 b64 b54 b55 b66
luaxmlrpc             master-g1bdc2373fb 	b45 b44 b43 b65 b64 b54 b55 b66
mysql                 master-g5d79af2a50 	b45 b44 b43 b65 b64 b54 b55 b66
mysqlclient           5.1.65+3   	b45 b44 b66 b65 b64 b54 b55 current b43
mysqlproxy            master-g92bb7f6106 	b45 b44 b43 b65 b64 b54 b55 b66
mysqlpython           1.2.3+8    	b45 b44 b43 b65 b64 b54 b55 b66
protobuf              master-g832d498170 	b45 b44 b43 b65 b64 b54 b55 b66
python                0.0.1      	sims b4 Winter2014 current b5 b6 b3
qserv                 tickets.DM-699-gdb91c11a52 	current b66
qserv_testdata        master-gac0d805e98 	current b69
scons                 2.1.0+7    	sims Winter2014 b4 b5 b6 b3
scons                 2.1.0+8    	b45 b44 b58 b66 b65 b64 b51 b54 b55 b43
sconsUtils            8.0.0.0    	sims Winter2014 b4 b5 b6 b3
sconsUtils            master-gcd8b8033a7 	b66 b65 b64
twisted               master-gb8024db1dc 	b45 b44 b43 b65 b64 b54 b55 b66
xrootd                master-gfc9bfb2059 	b45 b44 b43 b65 b64 b54 b55 b66
zookeeper             master-gc48457902f 	b45 b44 b43 b65 b64 b54 b55 b66
zopeinterface         master-g9b9798ca42 	b45 b44 b43 b65 b64 b54 b55 b66
[becla@lsst-dbdev5 3]$


Note that db 1.0 is not installed.


------

This is on Red Hat Enterprise Linux Server release 6.5 (Santiago)

I am completely blocked. How do I get around it?

Jacek

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