Vaikunth
See
admin/bootstrap/qserv-install-deps-ubuntu-14.04.sh
you might try to install all packages listed there
(bzip is among them)
I'd basically try
sudo apt-get install bison cmake curl doxygen-latex flex g++ git
latex2html libboost-all-dev libcurl4-openssl-dev libglib2.0-dev
libreadline-dev ncurses-dev openjdk-7-jdk openssl python-dev
python-numpy scons swig zlib1g-dev patch bzip2 bzip2-devel libbz2-dev
libpthread-workqueue-dev
Jacek
On 08/01/2014 02:40 PM, Vaikunth Thukral wrote:
> Hi,
>
> I looked at the log file (build.msg was empty but build.log looks like
> the main one):
>
> #################
> cat /home/vaikunth/QSERV/EupsBuildDir/Linux64/boost-1.55.0.1+1/build.log
> | grep "fail*"
> ...failed gcc.compile.c++
> bin.v2/libs/iostreams/build/gcc-4.6/release/threading-multi/bzip2.o...
> ...failed gcc.compile.c++
> bin.v2/libs/iostreams/build/gcc-4.6/release/link-static/threading-multi/bzip2.o...
> ...failed updating 2 targets...
> #################
>
> Looks like it can't compile something about multi-threading. More
> details from the log file:
>
> #################
> libs/iostreams/src/bzip2.cpp:20:56: fatal error: bzlib.h: No such file
> or directory
> compilation terminated.
>
> "g++" -ftemplate-depth-128 -O3 -finline-functions -Wno-inline
> -Wall -pthread -fPIC -DBOOST_ALL_NO_LIB=1 -DBOOST_IOSTREAMS_DYN_LINK=1
> -DBOOST_IOSTREAMS_USE_DEPRECATED -DNDEBUG -\
> I"." -c -o
> "bin.v2/libs/iostreams/build/gcc-4.6/release/threading-multi/bzip2.o"
> "libs/iostreams/src/bzip2.cpp"
>
> ...failed gcc.compile.c++
> bin.v2/libs/iostreams/build/gcc-4.6/release/threading-multi/bzip2.o...
>
> libs/iostreams/src/bzip2.cpp:20:56: fatal error: bzlib.h: No such file
> or directory
> compilation terminated.
>
> "g++" -ftemplate-depth-128 -O3 -finline-functions -Wno-inline
> -Wall -pthread -DBOOST_ALL_NO_LIB=1 -DBOOST_IOSTREAMS_USE_DEPRECATED
> -DNDEBUG -I"." -c -o "bin.v2/libs/iostreams/b\
> uild/gcc-4.6/release/link-static/threading-multi/bzip2.o"
> "libs/iostreams/src/bzip2.cpp"
>
> ...failed gcc.compile.c++
> bin.v2/libs/iostreams/build/gcc-4.6/release/link-static/threading-multi/bzip2.o...
> #################
>
> So the source for both errors is the absence of the header file bzlib.h.
> I googled around and found the easiest way was to just install libbz2
> manually.
> That seems to have worked.
>
> Working through the rest of the steps now. Thanks!
>
> -Vaikunth
>
>
> On Fri, Aug 1, 2014 at 3:57 PM, Jacek Becla <[log in to unmask]
> <mailto:[log in to unmask]>> wrote:
>
> Can you look at the log:
>
> /home/vaikunth/QSERV/__EupsBuildDir/Linux64/boost-1.__55.0.1+1/build.msg
>
> and post relevant section? Most likely you are missing a dependency
> (we DID get it to work on ubuntu 12.04 in the past, so this should
> be easily solvable.). Most likely it is a missing dependency,
> packages listed in qserv-install-deps-ubuntu-14.__04.sh
> <http://qserv-install-deps-ubuntu-14.04.sh>
> are similar to what is needed on 12.04, so you might peak there
> and see if you have these packages installed.
>
> Jacek
>
>
>
> On 08/01/2014 01:27 PM, Vaikunth Thukral wrote:
>
> Hi,
>
> I've read through some of the documentation and was working on
> installing qserv. As Kian-Tat mentioned, I used the @git* instead of
> @dev* repo and followed through the README instructions. I got stuck
> during the "eups distrib install qserv" step [1] (wall of text with
> error included below signature).
>
> In full disclosure I attempted this installation on Ubuntu 12.04
> LTS and
> the dependency installation folder only had the following
> options for
> Ubuntu:
> qserv-install-deps-ubuntu-13.__10.sh
> <http://qserv-install-deps-ubuntu-13.10.sh>
> <http://qserv-install-deps-__ubuntu-13.10.sh
> <http://qserv-install-deps-ubuntu-13.10.sh>>
> qserv-install-deps-ubuntu-14.__04.sh
> <http://qserv-install-deps-ubuntu-14.04.sh>
> <http://qserv-install-deps-__ubuntu-14.04.sh
> <http://qserv-install-deps-ubuntu-14.04.sh>>
>
>
> I'm not certain if this is a dependency issue and I ran both of
> them,
> but though I'd mention it anyway. Any clues as to what the issue
> could
> be? Everything before this ran without any errors.
>
> Thanks,
> -Vaikunth
>
> [1]
> ##############################__##############################__####################
>
> |eups distrib install qserv
> -rhttp://lsst-web.ncsa.__illinois.edu/~fjammes/qserv|
> <http://lsst-web.ncsa.illinois.edu/~fjammes/qserv%7C>
>
>
> [ 1/27 ] antlr 2.7.7
> done.
> [ 2/27 ] doxygen 1.8.2+2 (already installed)
> done.
> [ 3/27 ] expat 2.0.1
> done.
> [ 4/27 ] libevent 2.0.16-stable
> done.
> [ 5/27 ] lua 5.1.4
> done.
> [ 6/27 ] mysql 5.1.65
> done.
> [ 7/27 ] mysqlclient 5.1.65+3
> done.
> [ 8/27 ] python master-gcbf93ab65b ...
> Using externally provided Python 2.7.5 ::
> Anaconda 1.8.0
> (64-bit).
> [ 8/27 ] python master-gcbf93ab65b
> done.
> [ 9/27 ] swig 2.0.12
> done.
> [ 10/27 ] xrootd 3.2.8-qsPatch5
> done.
> [ 11/27 ] zookeeper 3.4.6
> done.
> [ 12/27 ] boost 1.55.0.1+1 ...
>
> ***** error: from
> /home/vaikunth/QSERV/__EupsBuildDir/Linux64/boost-1.__55.0.1+1/build.log:
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/token_ids.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/wave_config___constant.o
> common.mkdir
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/cpplexer
> ...on 1100th target...
> common.mkdir
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/cpplexer/__re2clex
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/cpplexer/__re2clex/aq.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/instantiate___defined_grammar.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/instantiate___re2c_lexer.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/instantiate___re2c_lexer_str.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/instantiate___predef_macros.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/instantiate___cpp_grammar.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/instantiate___cpp_literalgrs.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/instantiate___cpp_exprgrammar.o
> gcc.compile.c++
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/cpplexer/__re2clex/cpp_re.o
> gcc.archive
> bin.v2/libs/wave/build/gcc-4.__6/release/link-static/__threading-multi/libboost_wave.__a
> common.copy stage/lib/libboost_wave.a
> ...failed updating 2 targets...
> ...skipped 6 targets...
> ...updated 1103 targets...
> + exit -4
> eups distrib: Failed to build boost-1.55.0.1+1.eupspkg: Command:
> source /home/vaikunth/QSERV/eups/bin/__setups.sh; export
> EUPS_PATH=/home/vaikunth/__QSERV;
> (/home/vaikunth/QSERV/__EupsBuildDir/Linux64/boost-1.__55.0.1+1/build.sh)
> >>
> /home/vaikunth/QSERV/__EupsBuildDir/Linux64/boost-1.__55.0.1+1/build.log
> 2>&1
> 4>/home/vaikunth/QSERV/__EupsBuildDir/Linux64/boost-1.__55.0.1+1/build.msg
> exited with code 252
>
> ##############################__##############################__##############################__#
>
>
> On Fri, Jul 25, 2014 at 2:10 PM, Jacek Becla
> <[log in to unmask] <mailto:[log in to unmask]>
> <mailto:[log in to unmask]
> <mailto:[log in to unmask]>>> wrote:
>
> K-T
>
> Right! I'll update the trac page (I just copied & pasted
> from there, I didn't notice it got outdated).
>
> Thanks,
> Jacek
>
>
>
>
> On 07/25/2014 11:21 AM, Kian-Tat Lim wrote:
>
> Jacek and others,
>
> Please don't use dev.lsstcorp.org
> <http://dev.lsstcorp.org>
> <http://dev.lsstcorp.org> for git. This is outdated and
>
> deprecated and will stop working in the future.
>
> I think the readme* is not completely clear about
> how to
> checkout qserv, (we will fix it). It is basically
>
> git repo cloning (for LSST DM users)
> git clone
> git://dev.lsstcorp.org/LSST/____DMS/qserv
> <http://dev.lsstcorp.org/LSST/__DMS/qserv>
> <http://dev.lsstcorp.org/LSST/__DMS/qserv
> <http://dev.lsstcorp.org/LSST/DMS/qserv>>
>
>
>
> The preferred URL for developers with commit access
> (those who have
> submitted public keys) is
> [log in to unmask]:LSST/DMS/____qserv
>
>
> git repo cloning (for external users; anonymous,
> read-only)
> git clone
> http://dev.lsstcorp.org/git/____LSST/DMS/qserv
> <http://dev.lsstcorp.org/git/__LSST/DMS/qserv>
> <http://dev.lsstcorp.org/git/__LSST/DMS/qserv
> <http://dev.lsstcorp.org/git/LSST/DMS/qserv>>
>
>
> Here, it's http://git.lsstcorp.org/LSST/____DMS/qserv
> <http://git.lsstcorp.org/LSST/__DMS/qserv>
> <http://git.lsstcorp.org/LSST/__DMS/qserv
> <http://git.lsstcorp.org/LSST/DMS/qserv>>
>
>
>
> ##############################____############################__##__############
>
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