Author: [log in to unmask]
Date: Sat Mar 7 14:18:26 2015
New Revision: 2346
Log:
I create this driver as a copy of the EcalEventDisplay, including - as it was - the raw waveform, if available. I hope this will not be modified again
Added:
java/trunk/monitoring-drivers/src/main/java/org/hps/monitoring/ecal/plots/EcalEventDisplayWithRawWaveform.java
Added: java/trunk/monitoring-drivers/src/main/java/org/hps/monitoring/ecal/plots/EcalEventDisplayWithRawWaveform.java
=============================================================================
--- java/trunk/monitoring-drivers/src/main/java/org/hps/monitoring/ecal/plots/EcalEventDisplayWithRawWaveform.java (added)
+++ java/trunk/monitoring-drivers/src/main/java/org/hps/monitoring/ecal/plots/EcalEventDisplayWithRawWaveform.java Sat Mar 7 14:18:26 2015
@@ -0,0 +1,514 @@
+package org.hps.monitoring.ecal.plots;
+
+import hep.aida.IHistogram1D;
+import hep.aida.IHistogram2D;
+import hep.aida.IPlotter;
+import hep.aida.IPlotterFactory;
+import hep.aida.IPlotterStyle;
+
+import java.awt.Point;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+import java.io.File;
+import java.io.IOException;
+import java.util.ArrayList;
+import java.util.List;
+
+import org.hps.monitoring.ecal.eventdisplay.ui.PDataEventViewer;
+import org.hps.monitoring.ecal.eventdisplay.ui.PEventViewer;
+import org.hps.monitoring.ecal.eventdisplay.ui.Viewer;
+import org.hps.monitoring.ecal.eventdisplay.util.CrystalEvent;
+import org.hps.monitoring.ecal.eventdisplay.util.CrystalListener;
+import org.hps.recon.ecal.ECalUtils;
+import org.lcsim.event.CalorimeterHit;
+import org.lcsim.event.Cluster;
+import org.lcsim.event.EventHeader;
+import org.lcsim.geometry.Detector;
+import org.lcsim.util.Driver;
+import org.lcsim.util.aida.AIDA;
+
+/**
+ * Driver <code>EcalEventDisplay</code> generates the histograms shown
+ * to the user in the fifth tab of the monitoring application. An
+ * instance of the single event display is employed to allow for the
+ * selection of specific crystal channels.<br/>
+ * <br/>
+ * The implementation is as follows:
+ * <ul><li>The event display is opened in a separate window</li>
+ * <li>It is updated regularly, according to the event refresh rate</li>
+ * <li>If the user clicks on a crystal, the corresponding energy and time
+ * distributions (both of type <code>IHistogram1D</code>) are shown in
+ * the last panel of the monitoring application, as well as a 2D histogram
+ * (hit time vs. hit energy). Finally, if available, the raw waveshape (in
+ * mV) is displayed.</li>
+ *
+ * @author Andrea Celentano
+ */
+public class EcalEventDisplayWithRawWaveform extends Driver implements CrystalListener, ActionListener {
+ // Class variables.
+ private static final int NUM_CHANNELS = 11 * 47;
+
+ // Plotter objects and variables.
+ private IPlotter plotter;
+ private IPlotterFactory plotterFactory;
+ private AIDA aida = AIDA.defaultInstance();
+
+ // LCIO Collection names.
+ private String inputCollection = "EcalCalHits";
+ private String clusterCollection = "EcalClusters";
+ private String inputCollectionRaw = "EcalReadoutHits";
+
+ // Channel plot lists.
+ private ArrayList<IHistogram1D> channelEnergyPlot;
+ private ArrayList<IHistogram1D> clusterEnergyPlot;
+ private ArrayList<IHistogram1D> channelTimePlot;
+ //private ArrayList<IHistogram1D> channelRawWaveform;
+ private ArrayList<IHistogram2D> channelTimeVsEnergyPlot;
+
+ // Internal variables.
+ private PEventViewer viewer; // Single event display.
+ private int pedSamples = 10; //
+ private IPlotterStyle pstyle; // The plotter style for all plots.
+ private long lastEventTime = 0; // Tracks the time at which the last event occurred.
+ private int eventRefreshRate = 1; // The number of seconds before an update occurs.
+ private boolean resetOnUpdate = true; // Clears the event display on each update.
+ private double minEch = 10 * ECalUtils.MeV; // The energy scale minimum.
+ private double maxEch = 3500 * ECalUtils.MeV; // The energy scale maximum.
+ private int[] windowRaw = new int[NUM_CHANNELS]; // The number of samples in a waveform for each channel.
+ private boolean[] isFirstRaw = new boolean[NUM_CHANNELS]; // Whether a waveform plot was initiated for each channel.
+
+ // Plot style and title variables.
+ private static final String NO_TITLE = "";
+ private static final String SIGNAL_TIME_TITLE = "Time (ns)";
+ private static final String HIT_TIME_TITLE = "Hit Time (ns)";
+ private static final String SIGNAL_DATA_STYLE_COLOR = "orange";
+ private static final String RAW_WAVEFORM_TITLE = "Raw Waveform";
+ private static final String HIT_ENERGY_TITLE = "Hit Energy (GeV)";
+ private static final String CLUSTER_ENERGY_TITLE = "Cluster Energy (GeV)";
+ private static final String SIGNAL_AMPLITUDE_TITLE = "Signal Amplitude (mV)";
+
+ /**
+ * Sets the upper bound of the energy scales used by the driver.
+ * Energy units are in GeV.
+ * @param maxEch - The energy scale upper bound.
+ */
+ public void setMaxEch(double maxEch) {
+ this.maxEch = maxEch;
+ }
+
+ /**
+ * Sets the lower bound of the energy scales used by the driver.
+ * Energy units are in GeV.
+ * @param minEch - The lower energy scale bound.
+ */
+ public void setMinEch(double minEch) {
+ this.minEch = minEch;
+ }
+
+ public void setPedSamples(int pedSamples) {
+ this.pedSamples = pedSamples;
+ }
+ /**
+ * Sets the LCIO collection name for the processed calorimeter hits.
+ * @param inputCollection - The LCIO collection name.
+ */
+ public void setInputCollection(String inputCollection) {
+ this.inputCollection = inputCollection;
+ }
+
+ /**
+ * Sets the LCIO collection name for the raw waveform hits.
+ * @param inputCollectionRaw - The LCIO collection name.
+ */
+ public void setInputCollectionRaw(String inputCollectionRaw) {
+ this.inputCollectionRaw = inputCollectionRaw;
+ }
+
+ /**
+ * Sets the LCIO collection name for calorimeter clusters.
+ * @param inputClusterCollection - The LCIO collection name.
+ */
+ public void setInputClusterCollection(String inputClusterCollection) {
+ this.clusterCollection = inputClusterCollection;
+ }
+
+ /**
+ * Sets the rate at which the GUI updates its elements,
+ * @param eventRefreshRate - The rate at which the GUI should be
+ * updated, in seconds.
+ */
+ public void setEventRefreshRate(int eventRefreshRate) {
+ this.eventRefreshRate = eventRefreshRate;
+ }
+
+ /**
+ * Sets whether the event display should be cleared after event
+ * or whether it should retain the previously displayed results.
+ * @param resetOnUpdate - <code>true</code> means that the event
+ * display should be cleared on each update and <code>false</code>
+ * that it should not.
+ */
+ public void setResetOnUpdate(boolean resetOnUpdate) {
+ this.resetOnUpdate = resetOnUpdate;
+ }
+
+ /**
+ * Initializes the single channel monitoring plots for all crystal
+ * channels and defines the plotter region that contains them.
+ */
+ @Override
+ public void detectorChanged(Detector detector) {
+ // Reset the AIDA tree directory.
+ aida.tree().cd("/");
+
+ // Store histograms for the crystals.
+ channelEnergyPlot = new ArrayList<IHistogram1D>(NUM_CHANNELS);
+ channelTimePlot = new ArrayList<IHistogram1D>(NUM_CHANNELS);
+ channelRawWaveform = new ArrayList<IHistogram1D>(NUM_CHANNELS);
+ clusterEnergyPlot = new ArrayList<IHistogram1D>(NUM_CHANNELS);
+ channelTimeVsEnergyPlot = new ArrayList<IHistogram2D>(NUM_CHANNELS);
+
+ // Create the histograms for single channel energy and time
+ // distribution.
+ for(int ii = 0; ii < NUM_CHANNELS; ii++) {
+ // The above instruction is a terrible hack, just to fill
+ // the arrayList with all the elements. They'll be initialized
+ // properly during the event readout, Since we want to account
+ // for possibly different raw waveform dimensions!
+
+ //Get the x and y indices for the current channel.
+ int row = EcalMonitoringUtilities.getRowFromHistoID(ii);
+ int column = EcalMonitoringUtilities.getColumnFromHistoID(ii);
+
+ // Initialize the histograms for the current crystal channel.
+ channelEnergyPlot.add(aida.histogram1D(detector.getDetectorName() + " : "
+ + inputCollection + " : Hit Energy : " + column + " " + row
+ + ": " + ii, 100, -0.2, maxEch));
+ channelTimePlot.add(aida.histogram1D(detector.getDetectorName() + " : "
+ + inputCollection + " : Hit Time : " + column + " " + row + ": "
+ + ii, 100, 0, 400));
+ channelTimeVsEnergyPlot.add(aida.histogram2D(detector.getDetectorName()
+ + " : " + inputCollection + " : Hit Time Vs Energy : " + column
+ + " " + row + ": " + ii, 100, 0, 400, 100, -0.2, maxEch));
+ channelRawWaveform.add(aida.histogram1D(detector.getDetectorName() + " : "
+ + inputCollection + " : Hit Energy : " + column + " " + row + ": " + ii));
+ clusterEnergyPlot.add(aida.histogram1D(detector.getDetectorName() + " : "
+ + inputCollection + " : Cluster Energy : " + column + " " + row
+ + ": " + ii, 100, -0.2, maxEch));
+
+ // Note that no raw waveform has yet been read for this
+ // crystal/channel.
+ windowRaw[ii] = 1;
+ isFirstRaw[ii] = true;
+ }
+
+ // Define the plot region that will display the single channel
+ // plots in the monitoring application.
+ plotterFactory = aida.analysisFactory().createPlotterFactory("Single Channel");
+ plotter = plotterFactory.create("Single Channel");
+ pstyle = this.createDefaultStyle();
+ plotter.setTitle("");
+ plotter.createRegions(2,2);
+
+ // Define the first plot region.
+ pstyle.xAxisStyle().setLabel(HIT_ENERGY_TITLE);
+ pstyle.yAxisStyle().setLabel(NO_TITLE);
+ plotter.region(0).plot(channelEnergyPlot.get(0), pstyle);
+
+ // Define the second plot region.
+ pstyle.xAxisStyle().setLabel(HIT_TIME_TITLE);
+ pstyle.yAxisStyle().setLabel(NO_TITLE);
+ plotter.region(1).plot(channelTimePlot.get(0), pstyle);
+
+ // Define the third plot region; this encompasses the time vs.
+ // energy plots.
+ pstyle.xAxisStyle().setLabel(HIT_TIME_TITLE);
+ pstyle.yAxisStyle().setLabel(HIT_ENERGY_TITLE);
+ plotter.region(2).plot(channelTimeVsEnergyPlot.get(0), pstyle);
+
+
+
+
+ // Define the fourth plot region; this encompasses the raw
+ // wave form plots.
+ pstyle.xAxisStyle().setLabel(RAW_WAVEFORM_TITLE);
+ pstyle.yAxisStyle().setLabel(NO_TITLE);
+ pstyle.dataStyle().fillStyle().setColor(SIGNAL_DATA_STYLE_COLOR);
+ pstyle.dataStyle().markerStyle().setColor(SIGNAL_DATA_STYLE_COLOR);
+ pstyle.dataStyle().errorBarStyle().setVisible(false);
+ plotter.region(3).plot(channelRawWaveform.get(0), pstyle);
+
+
+ // Display the plot region.
+ plotter.show();
+
+ // Set the time tracker variables.
+ lastEventTime = 0;
+ }
+
+ /**
+ * Initializes the <code>Viewer</code> for the single event display.
+ * If a configuration file is available, then it is used by the
+ * <code>Viewer</code> to display hardware configuration mappings.
+ * Otherwise, this is excluded.
+ */
+ @Override
+ public void startOfData() {
+ // Check if the configuration mapping file exists.
+ File config = new File("ecal-mapping-config.csv");
+
+ // If the file exists, load the viewer that will display it.
+ if(config.exists() && config.canRead()) {
+ // Account for IO read errors. Only load this version if
+ // the data file can be read successfully.
+ try { viewer = new PDataEventViewer(config.getAbsolutePath()); }
+
+ // Otherwise, open the regular version.
+ catch (IOException e) { viewer = new PEventViewer(); }
+ }
+
+ // If the file is not present, then just load the normal version.
+ else { viewer = new PEventViewer(); }
+
+ // Set the viewer properties.
+ viewer.setScaleMinimum(minEch);
+ viewer.setScaleMaximum(maxEch);
+ viewer.addCrystalListener(this);
+
+ // Make the Viewer object visible.
+ viewer.setVisible(true);
+ }
+
+ /**
+ * Hides the single event display and disposes it from memory.
+ */
+ @Override
+ public void endOfData() {
+ viewer.setVisible(false);
+ viewer.dispose();
+ }
+
+ @Override
+ public void process(EventHeader event){
+ // Check whether enough time has passed to perform an update
+ // on the event display.
+ boolean update = false;
+ long currentTime = System.currentTimeMillis() / 1000;
+ if((currentTime - lastEventTime) > eventRefreshRate){
+ lastEventTime = currentTime;
+ update = true;
+ }
+
+ // If an update should be made, perform the update.
+ if(update && resetOnUpdate) { viewer.resetDisplay(); }
+
+ // If the event has calorimeter hit objects...
+ if(event.hasCollection(CalorimeterHit.class, inputCollection)) {
+ // Get the list of calorimeter hits.
+ List<CalorimeterHit> hits = event.get(CalorimeterHit.class, inputCollection);
+
+ // For each of the calorimeter hits...
+ for (CalorimeterHit hit : hits) {
+ // Get the x and y indices for the current hit.
+ int ix = hit.getIdentifierFieldValue("ix");
+ int iy = hit.getIdentifierFieldValue("iy");
+
+ if (iy != 0 && ix != 0) {
+ // Get the histogram index for the hit.
+ int id = EcalMonitoringUtilities.getHistoIDFromRowColumn(iy, ix);
+
+ // If the hit has energy, populate the plots.
+ if(hit.getCorrectedEnergy() > 0) {
+ channelEnergyPlot.get(id).fill(hit.getCorrectedEnergy());
+ channelTimePlot.get(id).fill(hit.getTime());
+ channelTimeVsEnergyPlot.get(id).fill(hit.getTime(), hit.getCorrectedEnergy());
+ }
+
+ // If an update to the event display should be
+ // performed, give it the hits.
+ if(update) { viewer.addHit(hit); }
+ }
+ }
+ }
+
+ // If there are clusters in the event...
+ if (event.hasCollection(Cluster.class, clusterCollection)) {
+ // Get the list of clusters.
+ List<Cluster> clusters = event.get(Cluster.class, clusterCollection);
+
+ // Iterate over the clusters and add them to the event
+ // display if appropriate.
+ for (Cluster cluster : clusters) {
+ // Get the ix and iy indices for the seed.
+ int ix = cluster.getCalorimeterHits().get(0).getIdentifierFieldValue("ix");
+ int iy = cluster.getCalorimeterHits().get(0).getIdentifierFieldValue("iy");
+
+ // Get the histogram index for the hit.
+ int id = EcalMonitoringUtilities.getHistoIDFromRowColumn(iy, ix);
+
+ // Add the cluster energy to the plot.
+ if(cluster.getEnergy() > 0.0) {
+ clusterEnergyPlot.get(id).fill(cluster.getEnergy());
+ }
+
+ // If an update is needed, add the cluster to the viewer.
+ if(update) { viewer.addCluster(cluster); }
+ }
+ }
+
+
+ // Plot the raw waveform only if raw tracker hit exist in the
+ // event.
+ if (event.hasCollection(RawTrackerHit.class, inputCollectionRaw)){
+ // Get the list of raw tracker hits.
+ List<RawTrackerHit> hits = event.get(RawTrackerHit.class, inputCollectionRaw);
+
+ // Process each raw tracker hit.
+ for (RawTrackerHit hit : hits) {
+ // Get the x and y indices for the hit.
+ int ix = hit.getIdentifierFieldValue("ix");
+ int iy = hit.getIdentifierFieldValue("iy");
+
+ if(iy != 0 && ix != 0) {
+ if(!ECalUtils.isInHole(iy, ix)) {
+ // Get the crystal ID for the current hit.
+ int id = ECalUtils.getHistoIDFromRowColumn(iy, ix);
+
+ // The window is length is not known by default.
+ // If this is the first hit, read the window
+ // length and initialize the plot.
+ if(isFirstRaw[id]) {
+ // Note that this plot is initialized.
+ isFirstRaw[id] = false;
+
+ // Set the waveform array.
+ windowRaw[id] = hit.getADCValues().length;
+
+ // Initialize the waveform plot.
+ channelRawWaveform.set(id, aida.histogram1D(detector.getDetectorName()
+ + " : " + inputCollectionRaw + " : Raw Waveform : " + ix + " "
+ + iy + ": " + id, windowRaw[id], -0.5 * ECalUtils.ecalReadoutPeriod,
+ (-0.5 + windowRaw[id]) * ECalUtils.ecalReadoutPeriod));
+ }
+
+ // If the plot should be updated, do so.
+ if(update) {
+ channelRawWaveform.get(id).reset();
+ for (int jj = 0; jj < windowRaw[id]; jj++) {
+ channelRawWaveform.get(id).fill(jj * ECalUtils.ecalReadoutPeriod,
+ hit.getADCValues()[jj] * ECalUtils.adcResolution * 1000);
+ }
+ double[] result = ECalUtils.computeAmplitude(hit.getADCValues(), windowRaw[id], pedSamples);
+ channelRawWaveform.get(id).setTitle("Ampl: " + String.format("%.2f", result[0])
+ + " mV , ped : " + String.format("%.2f", result[1]) + " "
+ + String.format("%.2f", result[2]) + " ADC counts");
+ plotter.region(3).refresh();
+ }
+ }
+ }
+ }
+ }
+
+
+ // Update the single event display.
+ if(update) { viewer.updateDisplay(); }
+ }
+
+ @Override
+ public void actionPerformed(ActionEvent ae) { }
+
+ @Override
+ public void crystalActivated(CrystalEvent e) { }
+
+ @Override
+ public void crystalDeactivated(CrystalEvent e) { }
+
+ /**
+ * Updates the monitoring plots for the crystal that was clicked.
+ */
+ @Override
+ public void crystalClicked(CrystalEvent e) {
+ // Get the crystal that was clicked in the LCSim coordinate system.
+ Point ecalPoint = Viewer.toEcalPoint(e.getCrystalID());
+
+ // Make sure that the clicked crystal is valid. Necessary??
+ if((ecalPoint.x != 0) && (ecalPoint.y != 0))
+ if (!EcalMonitoringUtilities.isInHole(ecalPoint.y, ecalPoint.x)) {
+ // Get the crystal ID.
+ int id = EcalMonitoringUtilities.getHistoIDFromRowColumn(ecalPoint.y, ecalPoint.x);
+
+ // Clear and replot region 0 for the new crystal.
+ plotter.region(0).clear();
+ pstyle.xAxisStyle().setLabel(HIT_ENERGY_TITLE);
+ pstyle.yAxisStyle().setLabel(NO_TITLE);
+ plotter.region(0).plot(channelEnergyPlot.get(id), pstyle);
+
+ // Clear and replot region 1 for the new crystal.
+ plotter.region(1).clear();
+ pstyle.xAxisStyle().setLabel(HIT_TIME_TITLE);
+ pstyle.yAxisStyle().setLabel(NO_TITLE);
+ plotter.region(1).plot(channelTimePlot.get(id), pstyle);
+
+ // Clear and replot region 2 for the new crystal.
+ plotter.region(2).clear();
+ pstyle.xAxisStyle().setLabel(HIT_TIME_TITLE);
+ pstyle.yAxisStyle().setLabel(HIT_ENERGY_TITLE);
+ plotter.region(2).plot(channelTimeVsEnergyPlot.get(id), pstyle);
+
+
+ // Process and plot the region 3 plot.
+ if(!isFirstRaw[id]) {
+ pstyle.yAxisStyle().setLabel(SIGNAL_AMPLITUDE_TITLE);
+ pstyle.xAxisStyle().setLabel(SIGNAL_TIME_TITLE);
+ pstyle.dataStyle().fillStyle().setColor(SIGNAL_DATA_STYLE_COLOR);
+ pstyle.dataStyle().markerStyle().setColor(SIGNAL_DATA_STYLE_COLOR);
+ pstyle.dataStyle().errorBarStyle().setVisible(false);
+ }
+ else {
+ pstyle.xAxisStyle().setLabel(HIT_ENERGY_TITLE);
+ pstyle.yAxisStyle().setLabel("");
+ }
+ plotter.region(3).plot(channelRawWaveform.get(id), pstyle);
+ }
+ }
+
+ /**
+ * Initializes the default style for plots.
+ * @return Returns an <code>IPlotterStyle</code> object that
+ * represents the default style for plots.
+ */
+ public IPlotterStyle createDefaultStyle() {
+ IPlotterStyle pstyle = plotterFactory.createPlotterStyle();
+ // Set the appearance of the axes.
+ pstyle.xAxisStyle().labelStyle().setBold(true);
+ pstyle.yAxisStyle().labelStyle().setBold(true);
+ pstyle.xAxisStyle().tickLabelStyle().setBold(true);
+ pstyle.yAxisStyle().tickLabelStyle().setBold(true);
+ pstyle.xAxisStyle().lineStyle().setColor("black");
+ pstyle.yAxisStyle().lineStyle().setColor("black");
+ pstyle.xAxisStyle().lineStyle().setThickness(2);
+ pstyle.yAxisStyle().lineStyle().setThickness(2);
+
+ // Set color settings.
+ pstyle.dataStyle().fillStyle().setParameter("colorMapScheme", "rainbow");
+ pstyle.dataStyle().fillStyle().setParameter("showZeroHeightBins", Boolean.FALSE.toString());
+ pstyle.dataStyle().errorBarStyle().setVisible(false);
+ pstyle.setParameter("hist2DStyle", "colorMap");
+
+ // Force auto range to zero.
+ pstyle.yAxisStyle().setParameter("allowZeroSuppression", "false");
+ pstyle.xAxisStyle().setParameter("allowZeroSuppression", "false");
+
+ // Set the title style.
+ pstyle.titleStyle().textStyle().setFontSize(20);
+
+ // Draw caps on error bars.
+ pstyle.dataStyle().errorBarStyle().setParameter("errorBarDecoration", (new Float(1.0f)).toString());
+
+ // Turn off grid lines until explicitly enabled.
+ pstyle.gridStyle().setVisible(false);
+
+ // Return the style.
+ return pstyle;
+ }
+}
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