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HPS-SVN  September 2015

HPS-SVN September 2015

Subject:

r3744 - in /java/trunk/evio: ./ src/main/java/org/hps/evio/

From:

[log in to unmask]

Reply-To:

Notification of commits to the hps svn repository <[log in to unmask]>

Date:

Thu, 1 Oct 2015 00:12:33 -0000

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (672 lines)

Author: [log in to unmask]
Date: Wed Sep 30 17:12:31 2015
New Revision: 3744

Log:
add SVT data integrity checks.

Modified:
    java/trunk/evio/pom.xml
    java/trunk/evio/src/main/java/org/hps/evio/AbstractSvtEvioReader.java
    java/trunk/evio/src/main/java/org/hps/evio/AugmentedSvtEvioReader.java
    java/trunk/evio/src/main/java/org/hps/evio/LCSimEngRunEventBuilder.java
    java/trunk/evio/src/main/java/org/hps/evio/SvtEvioReader.java
    java/trunk/evio/src/main/java/org/hps/evio/SvtEvioUtils.java
    java/trunk/evio/src/main/java/org/hps/evio/TestRunSvtEvioReader.java

Modified: java/trunk/evio/pom.xml
 =============================================================================
--- java/trunk/evio/pom.xml	(original)
+++ java/trunk/evio/pom.xml	Wed Sep 30 17:12:31 2015
@@ -18,15 +18,15 @@
     <dependencies>
         <dependency>
             <groupId>org.hps</groupId>
-            <artifactId>hps-tracking</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>org.hps</groupId>
             <artifactId>hps-record-util</artifactId>
         </dependency>
         <dependency>
             <groupId>org.hps</groupId>
             <artifactId>hps-run-database</artifactId>
+        </dependency>
+        <dependency>
+            <groupId>org.hps</groupId>
+            <artifactId>hps-tracking</artifactId>
         </dependency>
     </dependencies>
     <build>

Modified: java/trunk/evio/src/main/java/org/hps/evio/AbstractSvtEvioReader.java
 =============================================================================
--- java/trunk/evio/src/main/java/org/hps/evio/AbstractSvtEvioReader.java	(original)
+++ java/trunk/evio/src/main/java/org/hps/evio/AbstractSvtEvioReader.java	Wed Sep 30 17:12:31 2015
@@ -7,7 +7,8 @@
 import java.util.logging.Level;
 import java.util.logging.Logger;
 
-import org.hps.readout.svt.SvtHeaderDataInfo;
+import org.hps.record.svt.SvtHeaderDataInfo;
+import org.hps.util.BasicLogFormatter;
 import org.hps.util.Pair;
 import org.jlab.coda.jevio.BaseStructure;
 import org.jlab.coda.jevio.DataType;
@@ -40,8 +41,7 @@
 
     
     // Initialize the logger
-    protected static Logger logger = LogUtil.create(AbstractSvtEvioReader.class.getName(), 
-            new DefaultLogFormatter(), Level.INFO);
+    protected static Logger logger = LogUtil.create(AbstractSvtEvioReader.class.getName(), new BasicLogFormatter(), Level.INFO);
 
     // A Map from DAQ pair (FPGA/Hybrid or FEB ID/FEB Hybrid ID) to the
     // corresponding sensor
@@ -233,9 +233,6 @@
                 // extract header and tail information
                 SvtHeaderDataInfo headerData = this.extractSvtHeader(dataBank.getHeader().getNumber(), data);
                 
-                // Check the integrity of the SVT header data
-                this.checkSvtHeaderData(headerData);
-                
                 // Check that the multisample count is consistent
                 this.checkSvtSampleCount(sampleCount, headerData);
                 
@@ -243,17 +240,36 @@
                 headers.add(headerData);
                 
                 
-                // create array for the apv headers of known length
-                int multisampleHeaders[] = new int[sampleCount/4];
+                // Create array for the apv headers of known length
+                //int multisampleHeaderTails[] = new int[sampleCount/4];
+                
+                // Store the multisample headers
+                // Note that the length is not known but can't be longer than the multisample count
+                // in other words the data can be only header multisamples for example.
+                int multisampleHeaderData[] = new int[sampleCount];
+                int multisampleHeaderIndex = 0;
+
+                logger.fine("sampleCount " + sampleCount);
                 
                 // Loop through all of the samples and make hits
                 for (int samplesN = 0; samplesN < sampleCount; samplesN += 4) {
-
+                    
                     int[] samples = new int[4];
                     System.arraycopy(data, this.getDataHeaderLength() + samplesN, samples, 0, samples.length);
                     
-                    // Extract multisample header
-                    this.extractMultisampleTail(samples, samplesN/4, multisampleHeaders);
+                    logger.fine("samplesN " + samplesN + " multisampleHeaderCount " + multisampleHeaderIndex);
+                    if(SvtEvioUtils.isMultisampleHeader(samples))
+                        logger.fine("this is a header multisample for apv " + SvtEvioUtils.getApvFromMultiSample(samples) + " ch " + SvtEvioUtils.getChannelNumber(samples));
+                    else 
+                        logger.fine("this is a data   multisample for apv " + SvtEvioUtils.getApvFromMultiSample(samples) + " ch " + SvtEvioUtils.getChannelNumber(samples));
+                    
+                    
+                    // Extract tail word in multisample header
+                    //this.extractMultisampleHeaderTail(samples, samplesN/4, multisampleHeaderTails);
+                    
+                    // Extract data words from multisample header 
+                    multisampleHeaderIndex += this.extractMultisampleHeaderData(samples, multisampleHeaderIndex, multisampleHeaderData);
+                    
                     //if( SvtEvioUtils.isMultisampleHeader(samples) ) 
                     //    multisampleHeaders[samplesN/4] = SvtEvioUtils.getMultisampleTailWord(samples);
                     
@@ -262,9 +278,13 @@
                     rawHits.add(this.makeHit(samples));
                 }
                 
-                // add multisample headers to header data object
-                this.setMultiSampleHeaders(headerData, multisampleHeaders);
+                logger.fine("got " +  multisampleHeaderIndex + " multisampleHeaderIndex for " + sampleCount + " sampleCount");
+                
+                // add multisample header tails to header data object
+                this.setMultiSampleHeaders(headerData, multisampleHeaderIndex, multisampleHeaderData);
                 //headerData.setMultisampleHeaders(multisampleHeaders);
+                
+                //this.checkSvtHeaders(headers);
             }
         }
         
@@ -275,6 +295,10 @@
         // Add the collection of raw hits to the LCSim event
         lcsimEvent.put(SVT_HIT_COLLECTION_NAME, rawHits, RawTrackerHit.class, flag, READOUT_NAME);
 
+        
+        // Check that the SVT header data is valid
+        this.checkSvtHeaders(headers);
+        
         // Add SVT header data to the event
         this.addSvtHeadersToEvents(headers, lcsimEvent);
 
@@ -283,12 +307,12 @@
         return true;
     }
 
-    protected abstract void setMultiSampleHeaders(SvtHeaderDataInfo headerData, int[] multisampleHeaders);
-    
-    protected abstract void extractMultisampleTail(int[] multisample, int index, int[] multisampleHeaders);
-    
-   
-    
+    
+    
+    protected abstract void checkSvtHeaders(List<SvtHeaderDataInfo> headers) throws SvtEvioHeaderException;
+    protected abstract int extractMultisampleHeaderData(int[] samples, int i, int[] multisampleHeaderData);
+    protected abstract void setMultiSampleHeaders(SvtHeaderDataInfo headerData, int max, int[] multisampleHeaders);
+    protected abstract void extractMultisampleHeaderTail(int[] multisample, int index, int[] multisampleHeaders);
     protected abstract void checkSvtSampleCount(int sampleCount, SvtHeaderDataInfo headerData) throws SvtEvioHeaderException;
 
     /**

Modified: java/trunk/evio/src/main/java/org/hps/evio/AugmentedSvtEvioReader.java
 =============================================================================
--- java/trunk/evio/src/main/java/org/hps/evio/AugmentedSvtEvioReader.java	(original)
+++ java/trunk/evio/src/main/java/org/hps/evio/AugmentedSvtEvioReader.java	Wed Sep 30 17:12:31 2015
@@ -3,9 +3,11 @@
  */
 package org.hps.evio;
 
+import java.util.Arrays;
 import java.util.List;
-
-import org.hps.readout.svt.SvtHeaderDataInfo;
+import java.util.logging.Level;
+
+import org.hps.record.svt.SvtHeaderDataInfo;
 import org.lcsim.event.EventHeader;
 import org.lcsim.lcio.LCIOUtil;
 
@@ -38,15 +40,22 @@
     @Override
     protected void checkSvtHeaderData(SvtHeaderDataInfo header) throws SvtEvioHeaderException {
         int tail = header.getTail();
+        if(logger.getLevel().intValue() >= Level.FINE.intValue()) {
+            logger.fine("checkSvtHeaderData tail " + tail + "( " + Integer.toHexString(tail) + " )");
+            logger.fine("checkSvtHeaderData errorbit   " +  Integer.toHexString(SvtEvioUtils.getSvtTailSyncErrorBit(tail)));
+            logger.fine("checkSvtHeaderData OFerrorbit " +  Integer.toHexString(SvtEvioUtils.getSvtTailOFErrorBit(tail)));
+            logger.fine("checkSvtHeaderData skipcount  " +  Integer.toHexString(SvtEvioUtils.getSvtTailMultisampleSkipCount(tail)));
+        }
         if( SvtEvioUtils.getSvtTailSyncErrorBit(tail) != 0) {
-            throw new SvtEvioHeaderException("This header had a SyncError");
+            throw new SvtEvioHeaderApvBufferAddressException("This SVT header had a SyncError");
         }
         else if( SvtEvioUtils.getSvtTailOFErrorBit(tail) != 0) {
-            throw new SvtEvioHeaderException("This header had a OverFlowError");
+            throw new SvtEvioHeaderOFErrorException("This header had a OverFlowError");
         }
         else if( SvtEvioUtils.getSvtTailMultisampleSkipCount(tail) != 0) {
-            throw new SvtEvioHeaderException("This header had a skipCount " + SvtEvioUtils.getSvtTailMultisampleSkipCount(tail));
-        }
+            throw new SvtEvioHeaderSkipCountException("This header had a skipCount " + SvtEvioUtils.getSvtTailMultisampleSkipCount(tail) + " error");
+        }
+        logger.fine("checkSvtHeaderData passed all I guess");
     }
     
     @Override
@@ -65,15 +74,156 @@
     }
 
     @Override
-    protected void setMultiSampleHeaders(SvtHeaderDataInfo headerData, int[] multisampleHeaders) {
-        headerData.setMultisampleHeaders(multisampleHeaders);
-    }
-    
-    @Override
-    protected void extractMultisampleTail(int[] multisample, int index, int[] multisampleHeaders) {
-        if( SvtEvioUtils.isMultisampleHeader(multisample) ) 
+    protected void setMultiSampleHeaders(SvtHeaderDataInfo headerData, int n, int[] multisampleHeaders) {
+        //copy out the headers that are non-zero
+        int[] vals = new int[n];
+        System.arraycopy(multisampleHeaders, 0, vals, 0, n);
+        //logger.info("setMultiSampleHeaders: adding " + vals.length + " multisample headers");
+        headerData.setMultisampleHeaders(vals);
+    }
+    
+    @Override
+    protected void extractMultisampleHeaderTail(int[] multisample, int index, int[] multisampleHeaders) {
+        //logger.fine("extractMultisampleHeaderTail: index " + index);
+        if( SvtEvioUtils.isMultisampleHeader(multisample) && !SvtEvioUtils.isMultisampleTail(multisample))
             multisampleHeaders[index] = SvtEvioUtils.getMultisampleTailWord(multisample);
-    }
-    
+         //else 
+         //   logger.fine("extractMultisampleHeaderTail: this is a NOT multisample header at index " + index);
+        
+    }
+    
+    @Override
+    protected int extractMultisampleHeaderData(int[] samples, int index, int[] multisampleHeaderData) {
+        logger.fine("extractMultisampleHeaderData: index " + index);
+        if( SvtEvioUtils.isMultisampleHeader(samples) && !SvtEvioUtils.isMultisampleTail(samples) ) {
+            logger.fine("extractMultisampleHeaderData: this is a multisample header so add the words to index " + index);
+            System.arraycopy(samples, 0, multisampleHeaderData, index, samples.length);
+            return samples.length;
+        } else {
+            logger.fine("extractMultisampleHeaderData: this is a NOT multisample header ");
+            return 0;
+        }
+    }
+    
+    @Override
+    protected void checkSvtHeaders(List<SvtHeaderDataInfo> headers) throws SvtEvioHeaderException {
+        logger.fine("check " + headers.size() + " headers  ");
+        int[] bufferAddresses = new int[6];
+        int[] firstFrameCounts = new int[6];
+        boolean firstHeader = true;
+        int[] multisampleHeader;
+        int[] bufAddresses;
+        int[] frameCounts;
+        int[] readError;
+        int count;
+        int multisampleHeaderTailerrorBit;
+        for( SvtHeaderDataInfo headerDataInfo : headers ) {
+            logger.fine("checking header: " + headerDataInfo.toString());
+            
+            
+            // Check the header data
+            this.checkSvtHeaderData(headerDataInfo);
+            
+            int nMultisampleHeaders = headerDataInfo.getNumberOfMultisampleHeaders();
+            for(int iMultisampleHeader = 0; iMultisampleHeader < nMultisampleHeaders; iMultisampleHeader++) {
+                logger.fine("iMultisampleHeader " + iMultisampleHeader);
+                
+                multisampleHeader = SvtHeaderDataInfo.getMultisampleHeader(iMultisampleHeader, headerDataInfo);
+                
+                // get multisample tail error bit and check it
+                multisampleHeaderTailerrorBit = SvtEvioUtils.getErrorBitFromMultisampleHeader(SvtEvioUtils.getMultisampleTailWord(multisampleHeader));
+                logger.fine("multisampleHeaderTailerrorBit " + multisampleHeaderTailerrorBit + " from multisampleHeaderTail " + SvtEvioUtils.getMultisampleTailWord(multisampleHeader) + " ( " + Integer.toHexString( SvtEvioUtils.getMultisampleTailWord(multisampleHeader) ) + " )");
+                if( multisampleHeaderTailerrorBit != 0) 
+                    throw new SvtEvioHeaderMultisampleErrorBitException("This multisampleheader had the error bit set.");
+                
+                
+                // get buffer addresses
+                bufAddresses = SvtEvioUtils.getApvBufferAddresses(multisampleHeader);
+                
+                // get frame counts
+                frameCounts = SvtEvioUtils.getApvFrameCount(multisampleHeader);
+
+
+                if( bufAddresses.length != 6)
+                    throw new SvtEvioHeaderApvBufferAddressException("Invalid number of APV buffer addresses.");
+
+                if( frameCounts.length != 6)
+                    throw new SvtEvioHeaderApvFrameCountException("Invalid number of APV frame counts.");
+
+                if(logger.getLevel().intValue() >= Level.FINE.intValue()) {
+                    for (int i=0; i<bufAddresses.length; ++i) {
+                        logger.fine("buffer address " + i + "  " + bufAddresses[i]  + " ( " + Integer.toHexString( bufAddresses[i]) + " )");
+                    }
+                    for (int i=0; i<frameCounts.length; ++i) {
+                        logger.fine("frame count   " + i + "  " + frameCounts[i]  + " ( " + Integer.toHexString( frameCounts[i]) + " )");
+                    }
+                }
+
+                // Get a reference for comparison 
+                if(firstHeader) {
+                    
+                    System.arraycopy(bufAddresses, 0, bufferAddresses, 0, bufAddresses.length); 
+                    
+                    System.arraycopy(frameCounts, 0, firstFrameCounts, 0, frameCounts.length); 
+                                        
+                    firstHeader = false;
+                }
+                else {
+                    
+                    // Check that apv buffer addresses match
+                    if( !Arrays.equals(bufferAddresses, bufAddresses)) {
+                        for (int i=0; i<bufAddresses.length; ++i) {
+                            logger.info("buffer address " + i + "  " + bufAddresses[i]  + " ( " + Integer.toHexString( bufAddresses[i]) + " )");
+                        }
+                        for (int i=0; i<bufferAddresses.length; ++i) {
+                            logger.info("ref buffer address " + i + "  " + bufferAddresses[i]  + " ( " + Integer.toHexString( bufferAddresses[i]) + " )");
+                        }
+                        throw new SvtEvioHeaderApvBufferAddressException("The APV buffer addresses in this event do not match!");
+                    }
+                    
+                    // Check that apv frame count match
+                    if( !Arrays.equals(firstFrameCounts, frameCounts)) {
+                        for (int i=0; i<frameCounts.length; ++i) {
+                            logger.info("frame count " + i + "  " + frameCounts[i]  + " ( " + Integer.toHexString( frameCounts[i]) + " )");
+                        }
+                        for (int i=0; i<firstFrameCounts.length; ++i) {
+                            logger.info("ref frame count " + i + "  " + firstFrameCounts[i]  + " ( " + Integer.toHexString( firstFrameCounts[i]) + " )");
+                        }
+                        throw new SvtEvioHeaderApvFrameCountException("The APV frame counts in this event do not match!");
+                    }
+                }
+
+                // Check that the APV frame counts are incrementing
+                // remember to take into account the 2-bit rollover (duh!)
+                
+                count = -1;
+                for (int i=0; i<frameCounts.length; ++i) {
+                    logger.fine("frame count " + i + "  " + frameCounts[i]  + " ( " + Integer.toHexString( frameCounts[i]) + " )");
+
+                    if( frameCounts[i] > 15 ) 
+                        throw new SvtEvioHeaderApvFrameCountException("Frame count " + frameCounts[i] + " is larger than 2-bit number?");
+
+                    if( (count < 15 && frameCounts[i] < count) || ( count == 15 && frameCounts[i] != 0 ) ) {
+                        //logger.severe("Frame count " + frameCounts[i] + " was not increasing compared to previous " + count + " for APV " + i);
+                        throw new SvtEvioHeaderApvFrameCountException("Frame count " + frameCounts[i] + " was not increasing compared to previous " + count + " for index " + i + " ( tailword: " + Integer.toHexString( SvtEvioUtils.getMultisampleTailWord(multisampleHeader) ) + " )");
+                    }
+                    count = frameCounts[i];
+                }
+
+                
+                // check if there was any read errors
+                readError = SvtEvioUtils.getApvReadErrors(multisampleHeader);
+                
+                for (int i=0; i<readError.length; ++i) {
+                    logger.fine("i " + i + "  " + readError[i]  + " ( " + Integer.toHexString( readError[i]) + " )");
+                    if( readError[i] != 1)  // active low
+                        throw new SvtEvioHeaderApvReadErrorException("Read error for apv " + i);
+                }
+                
+                
+            } // multisampleheaders
+        }
+        
+    }
     
 }

Modified: java/trunk/evio/src/main/java/org/hps/evio/LCSimEngRunEventBuilder.java
 =============================================================================
--- java/trunk/evio/src/main/java/org/hps/evio/LCSimEngRunEventBuilder.java	(original)
+++ java/trunk/evio/src/main/java/org/hps/evio/LCSimEngRunEventBuilder.java	Wed Sep 30 17:12:31 2015
@@ -145,16 +145,34 @@
         } catch (final Exception e) {
             LOGGER.log(Level.SEVERE, "Error making ECal hits.", e);
         }
-
+        
         // Make SVT RawTrackerHits.
         try {
             svtReader.makeHits(evioEvent, lcsimEvent);
+        } catch (final SvtEvioHeaderMultisampleErrorBitException e) {
+            LOGGER.log(Level.SEVERE, "Error reading header information from the SVT. Stop!", e);
+            throw new RuntimeException(e);
+        } catch (final SvtEvioHeaderSkipCountException e) {
+            LOGGER.log(Level.SEVERE, "Error reading header information from the SVT. Stop!", e);
+            throw new RuntimeException(e);
+        } catch (final SvtEvioHeaderOFErrorException e) {
+            LOGGER.log(Level.SEVERE, "Error reading header information from the SVT. Stop!", e);
+            throw new RuntimeException(e);
+        } catch (final SvtEvioHeaderApvBufferAddressException e) {
+            LOGGER.log(Level.SEVERE, "Error reading header information from the SVT. Stop!", e);
+            throw new RuntimeException(e);
+        } catch (final SvtEvioHeaderApvFrameCountException e) {
+            LOGGER.log(Level.SEVERE, "Error reading header information from the SVT. Stop!", e);
+            throw new RuntimeException(e);
+        } catch (final SvtEvioHeaderApvReadErrorException e) {
+            LOGGER.log(Level.SEVERE, "Error reading header information from the SVT. Stop!", e);
+            throw new RuntimeException(e);
         } catch (final SvtEvioHeaderException e) {
-            LOGGER.log(Level.SEVERE, "Error reading header information from the SVT.", e);
+            LOGGER.log(Level.SEVERE, "General error reading header information from the SVT. Don't stop", e);
         } catch (final SvtEvioReaderException e) {
             LOGGER.log(Level.SEVERE, "Error making SVT hits.", e);
         } catch (final Exception e) {
-            LOGGER.log(Level.SEVERE, "Error making SVT hits. Don't think I should be able to get here?", e);
+            LOGGER.log(Level.SEVERE, "General error making SVT hits. I should handle this exception in some way", e);
         }
 
         // Write the current EPICS data into this event.

Modified: java/trunk/evio/src/main/java/org/hps/evio/SvtEvioReader.java
 =============================================================================
--- java/trunk/evio/src/main/java/org/hps/evio/SvtEvioReader.java	(original)
+++ java/trunk/evio/src/main/java/org/hps/evio/SvtEvioReader.java	Wed Sep 30 17:12:31 2015
@@ -2,7 +2,7 @@
 
 import java.util.List;
 
-import org.hps.readout.svt.SvtHeaderDataInfo;
+import org.hps.record.svt.SvtHeaderDataInfo;
 import org.hps.util.Pair;
 import org.jlab.coda.jevio.BaseStructure;
 import org.jlab.coda.jevio.EvioEvent;
@@ -231,14 +231,27 @@
     
     @Override
     protected void setMultiSampleHeaders(SvtHeaderDataInfo headerData,
+            int max, int[] multisampleHeaders) {
+        // TODO Auto-generated method stub
+        
+    }
+
+    @Override
+    protected void extractMultisampleHeaderTail(int[] multisample, int index,
             int[] multisampleHeaders) {
         // TODO Auto-generated method stub
         
     }
 
     @Override
-    protected void extractMultisampleTail(int[] multisample, int index,
-            int[] multisampleHeaders) {
+    protected int extractMultisampleHeaderData(int[] samples, int i,
+            int[] multisampleHeaderData) {
+        return 0;
+        
+    }
+
+    @Override
+    protected void checkSvtHeaders(List<SvtHeaderDataInfo> headers) throws SvtEvioHeaderException {
         // TODO Auto-generated method stub
         
     }

Modified: java/trunk/evio/src/main/java/org/hps/evio/SvtEvioUtils.java
 =============================================================================
--- java/trunk/evio/src/main/java/org/hps/evio/SvtEvioUtils.java	(original)
+++ java/trunk/evio/src/main/java/org/hps/evio/SvtEvioUtils.java	Wed Sep 30 17:12:31 2015
@@ -15,6 +15,12 @@
     
     private static final int TOTAL_SAMPLES = 6;
     public static final int  SAMPLE_MASK = 0xFFFF;
+    private static final int APV_HEADER_DATA_READ_ERROR_MASK = 0x1; //[0:0]
+    private static final int APV_HEADER_BUFFER_ADDRESS_MASK  = 0xFF; //[8:1]
+    private static final int APV_HEADER_DATA_FRAME_COUNT_MASK = 0xF; //[12:9]
+    private static final int APV_HEADER_DATA_APV_NR_MASK = 0x3; //[15:13]
+    
+
    
     // TODO: Move these to constants class
     public static final int APV25_PER_HYBRID = 5;
@@ -287,6 +293,93 @@
                 throw new RuntimeException("Invalid sample number! Valid range of values for n are from 0 - 5");
         }
     }
+    
+    
+    /**
+     *  Extract and return the nth SVT APV buffer address.
+     * 
+     *  @param sampleN : The apv address of interest. Valid values are 0 to 5?
+     *  @param data : a multisample header
+     *  @throws RuntimeException if the apv address number is out of range
+     *  @return address of the nth apv
+     * 
+     */
+    public static int getApvBufferAddress(int sampleN, int[] data) {
+
+        switch (sampleN) {
+            case 0:
+                return (data[0] >>> 1) & APV_HEADER_BUFFER_ADDRESS_MASK;
+            case 1:
+                return (data[0] >>> 17) & APV_HEADER_BUFFER_ADDRESS_MASK;
+            case 2:
+                return (data[1] >>> 1) & APV_HEADER_BUFFER_ADDRESS_MASK;
+            case 3:
+                return (data[1] >>> 17) & APV_HEADER_BUFFER_ADDRESS_MASK;
+            case 4:
+                return (data[2] >>> 1) & APV_HEADER_BUFFER_ADDRESS_MASK;
+            case 5:
+                return (data[2] >>> 17) & APV_HEADER_BUFFER_ADDRESS_MASK;
+            default:
+                throw new RuntimeException("Invalid address number! Valid range of values for n are from 0 - 5");
+        }
+    }
+    
+    /**
+     *  Extract and return the nth SVT APV read error.
+     * 
+     *  @param sampleN : The apv read error of interest. Valid values are 0 to 5.
+     *  @param data : a multisample header
+     *  @throws RuntimeException if the apv number is out of range
+     *  @return read error of the nth apv
+     * 
+     */
+    public static int getApvReadErrors(int sampleN, int[] data) {
+        switch (sampleN) {
+            case 0:
+                return data[0] & APV_HEADER_DATA_READ_ERROR_MASK;
+            case 1:
+                return (data[0] >>> 16) & APV_HEADER_DATA_READ_ERROR_MASK;
+            case 2:
+                return data[1] & APV_HEADER_DATA_READ_ERROR_MASK;
+            case 3:
+                return (data[1] >>> 16) & APV_HEADER_DATA_READ_ERROR_MASK;
+            case 4:
+                return data[2] & APV_HEADER_DATA_READ_ERROR_MASK;
+            case 5:
+                return (data[2] >>> 16) & APV_HEADER_DATA_READ_ERROR_MASK;
+            default:
+                throw new RuntimeException("Invalid address number! Valid range of values for n are from 0 - 5");
+        }
+    }
+    
+    /**
+     *  Extract and return the nth SVT APV read error.
+     * 
+     *  @param sampleN : The apv read error of interest. Valid values are 0 to 5.
+     *  @param data : a multisample header
+     *  @throws RuntimeException if the apv number is out of range
+     *  @return read error of the nth apv
+     * 
+     */
+    public static int getApvFrameCount(int sampleN, int[] data) {
+        switch (sampleN) {
+            case 0:
+                return (data[0] >>> 9) & APV_HEADER_DATA_FRAME_COUNT_MASK;
+            case 1:
+                return (data[0] >>> 25) & APV_HEADER_DATA_FRAME_COUNT_MASK;
+            case 2:
+                return (data[1] >>> 9) & APV_HEADER_DATA_FRAME_COUNT_MASK;
+            case 3:
+                return (data[1] >>> 25) & APV_HEADER_DATA_FRAME_COUNT_MASK;
+            case 4:
+                return (data[2] >>> 9) & APV_HEADER_DATA_FRAME_COUNT_MASK;
+            case 5:
+                return (data[2] >>> 25) & APV_HEADER_DATA_FRAME_COUNT_MASK;
+            default:
+                throw new RuntimeException("Invalid address number! Valid range of values for n are from 0 - 5");
+        }
+    }
+    
 
     /**
      *  Extract and return all SVT samples as an array 
@@ -302,6 +395,52 @@
         }
         return samples;
     }
+    
+    /**
+     *  Extract and return all SVT APV buffer addresses as an array 
+     * 
+     *  @param multisampleHeader : multisample header
+     *  @return An array containing all SVT APV buffer addresses
+     */
+    public static int[] getApvBufferAddresses(int[] multisampleHeader) {
+        int[] samples = new int[TOTAL_SAMPLES];
+        // Get all SVT Samples
+        for (int sampleN = 0; sampleN < TOTAL_SAMPLES; sampleN++) {
+            samples[sampleN] = getApvBufferAddress(sampleN, multisampleHeader);
+        }
+        return samples;
+    }
+    
+    /**
+     *  Extract and return all SVT APV read errorsas an array 
+     * 
+     *  @param multisampleHeader : multisample header
+     *  @return An array containing all SVT APV read errors
+     */
+    public static int[] getApvReadErrors(int[] multisampleHeader) {
+        int[] samples = new int[TOTAL_SAMPLES];
+        // Get all SVT Samples
+        for (int sampleN = 0; sampleN < TOTAL_SAMPLES; sampleN++) {
+            samples[sampleN] = getApvReadErrors(sampleN, multisampleHeader);
+        }
+        return samples;
+    }
+    
+    /**
+     *  Extract and return all SVT APV read errorsas an array 
+     * 
+     *  @param multisampleHeader : multisample header
+     *  @return An array containing all SVT APV read errors
+     */
+    public static int[] getApvFrameCount(int[] multisampleHeader) {
+        int[] samples = new int[TOTAL_SAMPLES];
+        // Get all SVT Samples
+        for (int sampleN = 0; sampleN < TOTAL_SAMPLES; sampleN++) {
+            samples[sampleN] = getApvFrameCount(sampleN, multisampleHeader);
+        }
+        return samples;
+    }
+
 
     /**
      *  Private constructor to prevent the class from being instantiated.

Modified: java/trunk/evio/src/main/java/org/hps/evio/TestRunSvtEvioReader.java
 =============================================================================
--- java/trunk/evio/src/main/java/org/hps/evio/TestRunSvtEvioReader.java	(original)
+++ java/trunk/evio/src/main/java/org/hps/evio/TestRunSvtEvioReader.java	Wed Sep 30 17:12:31 2015
@@ -2,7 +2,7 @@
 
 import java.util.List;
 
-import org.hps.readout.svt.SvtHeaderDataInfo;
+import org.hps.record.svt.SvtHeaderDataInfo;
 import org.hps.util.Pair;
 import org.jlab.coda.jevio.BaseStructure;
 import org.lcsim.detector.tracker.silicon.HpsSiSensor;
@@ -194,14 +194,27 @@
 
     @Override
     protected void setMultiSampleHeaders(SvtHeaderDataInfo headerData,
+            int max, int[] multisampleHeaders) {
+        // TODO Auto-generated method stub
+        
+    }
+
+    @Override
+    protected void extractMultisampleHeaderTail(int[] multisample, int index,
             int[] multisampleHeaders) {
         // TODO Auto-generated method stub
         
     }
 
     @Override
-    protected void extractMultisampleTail(int[] multisample, int index,
-            int[] multisampleHeaders) {
+    protected int extractMultisampleHeaderData(int[] samples, int i,
+            int[] multisampleHeaderData) {
+       return 0;
+        
+    }
+
+    @Override
+    protected void checkSvtHeaders(List<SvtHeaderDataInfo> headers) {
         // TODO Auto-generated method stub
         
     }

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