Author: [log in to unmask]
Date: Tue Nov 10 15:21:05 2015
New Revision: 3947
Log:
Updates and improvements to EVIO metadata reader; changes and cleanup to record-util module.
Added:
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagMask.java
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/triggerbank/TriggerType.java
- copied, changed from r3945, java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagBitMask.java
Removed:
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/RunSummaryMap.java
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventCountProcessor.java
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagBitMask.java
Modified:
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/AidaMetadataReader.java
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/CrawlerFileUtilities.java
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatCrawler.java
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatUtilities.java
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/EvioMetadataReader.java
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileMetadataReader.java
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileSet.java
java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/LcioMetadataReader.java
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsData.java
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsEvioProcessor.java
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagConstant.java
java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EvioBankTag.java
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/AidaMetadataReader.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/AidaMetadataReader.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/AidaMetadataReader.java Tue Nov 10 15:21:05 2015
@@ -12,7 +12,7 @@
*
* @author Jeremy McCormick, SLAC
*/
-public class AidaMetadataReader implements FileMetadataReader {
+final class AidaMetadataReader implements FileMetadataReader {
/**
* Get the metadata for a ROOT DQM file.
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/CrawlerFileUtilities.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/CrawlerFileUtilities.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/CrawlerFileUtilities.java Tue Nov 10 15:21:05 2015
@@ -7,7 +7,7 @@
*
* @author Jeremy McCormick, SLAC
*/
-public class CrawlerFileUtilities {
+final class CrawlerFileUtilities {
/**
* Get run number from file name assuming it looks like "hps_001234".
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatCrawler.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatCrawler.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatCrawler.java Tue Nov 10 15:21:05 2015
@@ -35,7 +35,7 @@
*
* @author Jeremy McCormick, SLAC
*/
-public class DatacatCrawler {
+public final class DatacatCrawler {
/**
* Visitor which creates a {@link FileSet} from walking a directory tree.
@@ -175,7 +175,7 @@
* @param folder the folder in the datacat
* @throws RuntimeException if the given path does not exist or it is not a folder
*/
- void checkFolder(final String folder) {
+ private void checkFolder(final String folder) {
final DatacatClient datacatClient = new DatacatClientFactory().createClient();
if (!datacatClient.exists(folder)) {
throw new RuntimeException("The folder " + folder + " does not exist in the data catalog.");
@@ -191,7 +191,7 @@
* @param args the command line arguments
* @return this object (for method chaining)
*/
- public DatacatCrawler parse(final String[] args) {
+ private DatacatCrawler parse(final String[] args) {
config = new CrawlerConfig();
LOGGER.config("parsing command line options");
@@ -323,6 +323,11 @@
}
LOGGER.config("dataset site " + site);
config.setDatasetSite(site);
+
+ // Dry run.
+ if (cl.hasOption("D")) {
+ config.setDryRun(true);
+ }
} catch (final ParseException e) {
throw new RuntimeException("Error parsing options.", e);
@@ -353,7 +358,7 @@
/**
* Run the crawler job.
*/
- void run() {
+ private void run() {
// Create the file visitor for crawling the root directory with the given date filter.
final DatacatFileVisitor visitor = new DatacatFileVisitor();
@@ -411,7 +416,7 @@
throw new RuntimeException("HTTP error code " + response + " received from server.");
}
} else {
- LOGGER.info("update on " + file.getPath() + " skipped from dry run");
+ LOGGER.info("skipped updated on " + file.getPath() + " from dry run");
}
}
LOGGER.info("successfully added " + formatFiles.size() + " " + fileFormat + " files");
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatUtilities.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatUtilities.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/DatacatUtilities.java Tue Nov 10 15:21:05 2015
@@ -21,7 +21,7 @@
/**
* Static map of strings to dataset file formats.
*/
- static Map<String, DatasetFileFormat> formatMap = new HashMap<String, DatasetFileFormat>();
+ private static Map<String, DatasetFileFormat> formatMap = new HashMap<String, DatasetFileFormat>();
static {
for (final DatasetFileFormat format : DatasetFileFormat.values()) {
formatMap.put(format.extension(), format);
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/EvioMetadataReader.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/EvioMetadataReader.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/EvioMetadataReader.java Tue Nov 10 15:21:05 2015
@@ -2,38 +2,49 @@
import java.io.File;
import java.io.IOException;
+import java.math.RoundingMode;
+import java.text.DecimalFormat;
+import java.util.ArrayList;
import java.util.HashMap;
import java.util.LinkedHashMap;
+import java.util.List;
import java.util.Map;
import java.util.Map.Entry;
import java.util.Set;
import java.util.logging.Level;
import java.util.logging.Logger;
-import org.hps.record.evio.EventTagBitMask;
+import org.hps.record.epics.EpicsData;
+import org.hps.record.epics.EpicsEvioProcessor;
import org.hps.record.evio.EventTagConstant;
+import org.hps.record.evio.EventTagMask;
import org.hps.record.evio.EvioEventUtilities;
import org.hps.record.evio.EvioFileUtilities;
+import org.hps.record.scalers.ScalerData;
import org.hps.record.scalers.ScalersEvioProcessor;
+import org.hps.record.triggerbank.TriggerType;
import org.jlab.coda.jevio.EvioEvent;
import org.jlab.coda.jevio.EvioException;
import org.jlab.coda.jevio.EvioReader;
/**
- * Reads metadata from EVIO files.
- *
+ * Reads metadata from EVIO files, including the event count, run min and run max expected by the datacat,
+ * as well as many custom field values applicable to HPS EVIO raw data.
+ * <p>
+ * The size of the data file is set externally to this reader using the datacat client.
+ *
* @author Jeremy McCormick, SLAC
*/
-public class EvioMetadataReader implements FileMetadataReader {
+final class EvioMetadataReader implements FileMetadataReader {
/**
* Initialize the logger.
*/
private static Logger LOGGER = Logger.getLogger(EvioMetadataReader.class.getPackage().getName());
-
+
/**
* Get the EVIO file metadata.
- *
+ *
* @param file the EVIO file
* @return the metadata map of key and value pairs
*/
@@ -42,26 +53,37 @@
Integer firstTimestamp = null;
Integer lastTimestamp = null;
+ Integer firstPhysicsTimestamp = null;
+ Integer lastPhysicsTimestamp = null;
+ int totalEvents = 0;
int badEvents = 0;
- int eventCount = 0;
int epicsEvents = 0;
- int scalerBanks = 0;
- boolean prestart = false;
- boolean end = false;
- boolean go = false;
+ int scalerEvents = 0;
+ int physicsEvents = 0;
+ int syncEvents = 0;
+ int pauseEvents = 0;
+ int prestartEvents = 0;
+ int endEvents = 0;
+ int goEvents = 0;
boolean blinded = true;
Integer run = null;
Integer lastPhysicsEvent = null;
Integer firstPhysicsEvent = null;
+ double triggerRate = 0;
+ List<ScalerData> scalerData = new ArrayList<ScalerData>();
+ List<EpicsData> epicsData = new ArrayList<EpicsData>();
+
+ // Create map for counting event masks.
+ Map<TriggerType, Integer> eventCounts = new HashMap<TriggerType, Integer>();
+ for (TriggerType mask : TriggerType.values()) {
+ eventCounts.put(mask, 0);
+ }
- // Create map for counting event masks.
- Map<EventTagBitMask, Integer> triggerCounts = new HashMap<EventTagBitMask, Integer>();
- for (EventTagBitMask mask : EventTagBitMask.values()) {
- triggerCounts.put(mask, 0);
- }
-
// Scaler processor to check for scaler bank.
ScalersEvioProcessor scalersProcessor = new ScalersEvioProcessor();
+
+ // EPICS data processor.
+ EpicsEvioProcessor epicsProcessor = new EpicsEvioProcessor();
// Get the file number from the name.
final int fileNumber = EvioFileUtilities.getSequenceFromName(file);
@@ -72,10 +94,9 @@
}
EvioReader evioReader = null;
- try {
-
- evioReader = EvioFileUtilities.open(file, true);
-
+ try {
+ // Open file in sequential mode.
+ evioReader = EvioFileUtilities.open(file, true);
EvioEvent evioEvent = null;
// Event read loop.
@@ -84,122 +105,173 @@
// Read in an EVIO event, trapping exceptions in case a parse error occurs.
boolean badEvent = false;
try {
- evioEvent = evioReader.parseNextEvent();
+ // Parse next event.
+ evioEvent = evioReader.parseNextEvent();
} catch (IOException | EvioException e) {
+ // Trap event parsing errors from bad EVIO data.
badEvent = true;
+ badEvents++;
LOGGER.warning("bad EVIO event " + evioEvent.getEventNumber() + " could not be parsed");
+ } finally {
+ // End of file.
+ if (!badEvent && evioEvent == null) {
+ LOGGER.info("EOF after " + totalEvents + " events");
+ break;
+ }
+
+ // Increment event count.
+ totalEvents++;
}
- // Increment bad event count and continue.
+ // Continue to next event if a parse error occurred.
if (badEvent) {
- badEvents++;
continue;
- }
-
- // End of file.
- if (evioEvent == null) {
- LOGGER.info("end of file reached after " + eventCount + " events");
- break;
- }
-
+ }
+
+ // Debug print event number and tag.
+ LOGGER.finest("parsed event " + evioEvent.getEventNumber() + " with tag 0x" + String.format("%08x", evioEvent.getHeader().getTag()));
+
// Process different event types.
- if (EventTagConstant.PRESTART.equals(evioEvent)) {
+ if (EventTagConstant.PRESTART.matches(evioEvent)) {
// File has PRESTART event.
- LOGGER.info("found PRESTART event " + evioEvent.getEventNumber());
- prestart = true;
+ LOGGER.fine("found PRESTART event " + evioEvent.getEventNumber());
+ ++prestartEvents;
// Set the run number from the PRESTART event.
final int[] controlEventData = EvioEventUtilities.getControlEventData(evioEvent);
if (run == null) {
run = controlEventData[1];
- LOGGER.info("set run to " + run + " from PRESTART");
- }
-
- } else if (EventTagConstant.GO.equals(evioEvent)) {
+ LOGGER.fine("set run to " + run + " from PRESTART");
+ }
+
+ // Set the first timestamp from the PRESTART event.
+ if (firstTimestamp == null) {
+ firstTimestamp = controlEventData[0];
+ LOGGER.fine("set first timestamp to " + firstTimestamp + " from PRESTART event " + evioEvent.getEventNumber());
+ }
+
+ } else if (EventTagConstant.GO.matches(evioEvent)) {
// File has GO event.
- go = true;
-
- // Set the first timestamp from the GO event.
- final int[] controlEventData = EvioEventUtilities.getControlEventData(evioEvent);
- firstTimestamp = controlEventData[0];
- LOGGER.info("set first timestamp to " + firstTimestamp + " from GO event " + evioEvent.getEventNumber());
-
- } else if (EventTagConstant.END.equals(evioEvent)) {
+ goEvents++;
+
+ // Set first timestamp from the GO event (will not override PRESTART time).
+ if (firstTimestamp == null) {
+ final int[] controlEventData = EvioEventUtilities.getControlEventData(evioEvent);
+ firstTimestamp = controlEventData[0];
+ LOGGER.fine("set first timestamp to " + firstTimestamp + " from GO event " + evioEvent.getEventNumber());
+ }
+
+ } else if (EventTagConstant.END.matches(evioEvent)) {
// File has END event.
- LOGGER.info("got END event");
- end = true;
+ LOGGER.fine("got END event");
+ endEvents++;
// Set the last timestamp from the END event.
final int[] controlEventData = EvioEventUtilities.getControlEventData(evioEvent);
lastTimestamp = controlEventData[0];
- LOGGER.info("set last timestamp " + lastTimestamp + " from END event " + evioEvent.getEventNumber());
+ LOGGER.fine("set last timestamp " + lastTimestamp + " from END event " + evioEvent.getEventNumber());
if (run == null) {
run = controlEventData[1];
- LOGGER.info("set run to " + run);
- }
+ LOGGER.fine("set run to " + run);
+ }
+
+ } else if (EventTagConstant.PAUSE.matches(evioEvent)) {
+
+ // Count pause events.
+ pauseEvents++;
} else if (EvioEventUtilities.isPhysicsEvent(evioEvent)) {
- // Event count on the file only includes physics events.
- eventCount++;
+ // Count physics events.
+ physicsEvents++;
// Get head bank.
final int[] headBankData = EvioEventUtilities.getHeadBankData(evioEvent);
- // Set first timestamp from head bank.
- if (firstTimestamp == null) {
+ // Is head bank present?
+ if (headBankData != null) {
+
+ // Is timestamp set?
if (headBankData[3] != 0) {
- firstTimestamp = headBankData[3];
- LOGGER.info("set first timestamp to " + firstTimestamp + " from physics event " + evioEvent.getEventNumber());
+
+ // Set first timestamp.
+ if (firstTimestamp == null) {
+ firstTimestamp = headBankData[3];
+ LOGGER.fine("set first timestamp to " + firstTimestamp + " from physics event " + evioEvent.getEventNumber());
+ }
+
+ // Set first physics timestamp.
+ if (firstPhysicsTimestamp == null) {
+ firstPhysicsTimestamp = headBankData[3];
+ LOGGER.fine("set first physics timestamp to " + firstTimestamp + " from event " + evioEvent.getEventNumber());
+ }
+
+ // Set last physics timestamp.
+ lastPhysicsTimestamp = headBankData[3];
+ LOGGER.finest("set last physics timestamp to " + firstTimestamp + " from event " + evioEvent.getEventNumber());
+
+ // Set last timestamp.
+ lastTimestamp = headBankData[3];
}
- }
-
- // Set run number from head bank if not set already.
- if (run == null) {
- run = headBankData[1];
- LOGGER.info("set run to " + run + " from physics event " + evioEvent.getEventNumber());
- }
-
+
+ // Set run number.
+ if (run == null) {
+ run = headBankData[1];
+ LOGGER.info("set run to " + run + " from physics event " + evioEvent.getEventNumber());
+ }
+ }
+
// Get the event ID data.
final int[] eventIdData = EvioEventUtilities.getEventIdData(evioEvent);
- if (eventIdData == null) {
- throw new RuntimeException("The event ID data bank for event " + evioEvent.getEventNumber() + " is null.");
- }
-
- // Set the first physics event from event ID data.
- if (firstPhysicsEvent == null) {
- firstPhysicsEvent = eventIdData[0];
- LOGGER.info("set start event " + firstPhysicsEvent + " from physics event " + evioEvent.getEventNumber());
- }
-
- // Set the last physics event from the event ID data.
- lastPhysicsEvent = eventIdData[0];
-
- // Set the last timestamp from head bank.
- if (headBankData[3] != 0) {
- lastTimestamp = headBankData[3];
- }
-
- // Increment scaler bank count if exists in event.
+ if (eventIdData != null) {
+
+ // Set the last physics event.
+ lastPhysicsEvent = eventIdData[0];
+
+ // Set the first physics event.
+ if (firstPhysicsEvent == null) {
+ firstPhysicsEvent = eventIdData[0];
+ LOGGER.fine("set start event " + firstPhysicsEvent + " from physics event " + evioEvent.getEventNumber());
+ }
+ }
+
+ // Count scaler events.
scalersProcessor.process(evioEvent);
if (scalersProcessor.getCurrentScalerData() != null) {
- scalerBanks++;
- }
-
- // Increment event mask counts for each type.
- Set<EventTagBitMask> masks = EventTagBitMask.getEventTagBitMasks(evioEvent);
- for (EventTagBitMask mask : masks) {
- int count = triggerCounts.get(mask) + 1;
- triggerCounts.put(mask, count);
- }
-
- } else if (EventTagConstant.EPICS.equals(evioEvent)) {
+ scalerData.add(scalersProcessor.getCurrentScalerData());
+ scalerEvents++;
+ }
+
+ // Count trigger types for this event.
+ Set<TriggerType> triggerTypes = TriggerType.getTriggerTypes(evioEvent);
+ for (TriggerType mask : triggerTypes) {
+ int count = eventCounts.get(mask) + 1;
+ eventCounts.put(mask, count);
+ LOGGER.finer("incremented " + mask.name() + " to " + count);
+ }
+
+ // Count sync events.
+ if (EventTagMask.SYNC.matches(evioEvent.getHeader().getTag())) {
+ // Count sync events.
+ ++syncEvents;
+ LOGGER.finer("got sync event from tag " + String.format("%08x", evioEvent.getHeader().getTag()));
+ }
+
+ } else if (EventTagConstant.EPICS.matches(evioEvent)) {
+
// Count EPICS events.
++epicsEvents;
- }
+
+ // Get EPICS data for charge calculation.
+ epicsProcessor.process(evioEvent);
+ EpicsData epicsEvent = epicsProcessor.getEpicsData();
+ if (epicsEvent.hasKey("scaler_calc1")) {
+ epicsData.add(epicsEvent);
+ }
+ }
}
} catch (final EvioException e) {
@@ -215,34 +287,89 @@
}
}
}
-
+
+ LOGGER.info("done reading " + totalEvents + " events");
+
+ // Rough trigger rate calculation.
+ triggerRate = calculateTriggerRate(firstPhysicsTimestamp, lastPhysicsTimestamp, physicsEvents);
+
+ // Calculate ungated charge.
+ //double ungatedCharge = calculateCharge(epicsData, firstPhysicsTimestamp, lastPhysicsTimestamp);
+
+ // Calculated gated charge.
+ //double gatedCharge = calculateGatedCharge(ungatedCharge, scalerData, ScalerDataIndex.FCUP_TRG_GATED, ScalerDataIndex.FCUP_TRG_UNGATED);
+
// Create and fill the metadata map.
- final Map<String, Object> metaDataMap = new LinkedHashMap<String, Object>();
- metaDataMap.put("runMin", run);
- metaDataMap.put("runMax", run);
- metaDataMap.put("eventCount", eventCount);
- metaDataMap.put("FILE", fileNumber);
- metaDataMap.put("FIRST_TIMESTAMP", firstTimestamp);
- metaDataMap.put("LAST_TIMESTAMP", lastTimestamp);
- metaDataMap.put("FIRST_PHYSICS_EVENT", firstPhysicsEvent);
- metaDataMap.put("LAST_PHYSICS_EVENT", lastPhysicsEvent);
- metaDataMap.put("BAD_EVENTS", badEvents);
- metaDataMap.put("EPICS_EVENTS", epicsEvents);
- metaDataMap.put("SCALER_BANKS", scalerBanks);
- metaDataMap.put("END", end);
- metaDataMap.put("PRESTART", prestart);
- metaDataMap.put("GO", go);
- metaDataMap.put("BLINDED", blinded);
-
- // Add the event mask counts.
- for (Entry<EventTagBitMask, Integer> entry : triggerCounts.entrySet()) {
- // These two keys aren't working right so don't include them.
- if (EventTagBitMask.PHYSICS != entry.getKey() && EventTagBitMask.SYNC != entry.getKey()) {
- metaDataMap.put(entry.getKey().name(), entry.getValue());
- }
- }
-
+ final Map<String, Object> metadataMap = new LinkedHashMap<String, Object>();
+
+ // Built-in fields of datacat.
+ metadataMap.put("runMin", run);
+ metadataMap.put("runMax", run);
+ metadataMap.put("eventCount", totalEvents);
+
+ // Run number.
+ metadataMap.put("RUN", run);
+
+ // File sequence number.
+ metadataMap.put("FILE_NUMBER", fileNumber);
+
+ // Blinded flag.
+ metadataMap.put("BLINDED", blinded);
+
+ // First and last timestamps which may come from control or physics events.
+ metadataMap.put("FIRST_TIMESTAMP", firstTimestamp);
+ metadataMap.put("LAST_TIMESTAMP", lastTimestamp);
+
+ // First and last physics events.
+ metadataMap.put("FIRST_PHYSICS_EVENT", firstPhysicsEvent);
+ metadataMap.put("LAST_PHYSICS_EVENT", lastPhysicsEvent);
+
+ // First and last physics event timestamps.
+ metadataMap.put("FIRST_PHYSICS_TIMESTAMP", firstPhysicsTimestamp);
+ metadataMap.put("LAST_PHYSICS_TIMESTAMP", lastPhysicsTimestamp);
+
+ // Event counts.
+ metadataMap.put("PHYSICS_EVENTS", physicsEvents);
+ metadataMap.put("BAD_EVENTS", badEvents);
+ metadataMap.put("EPICS_EVENTS", epicsEvents);
+ metadataMap.put("SCALER_EVENTS", scalerEvents);
+ metadataMap.put("END_EVENTS", endEvents);
+ metadataMap.put("PRESTART_EVENTS", prestartEvents);
+ metadataMap.put("GO_EVENTS", goEvents);
+ metadataMap.put("PAUSE_EVENTS", pauseEvents);
+ metadataMap.put("SYNC_EVENTS", syncEvents);
+
+ // Trigger rate.
+ DecimalFormat df = new DecimalFormat("#.####");
+ df.setRoundingMode(RoundingMode.CEILING);
+ metadataMap.put("TRIGGER_RATE_KHZ", Double.parseDouble(df.format(triggerRate)));
+
+ // Add the trigger counts.
+ for (Entry<TriggerType, Integer> entry : eventCounts.entrySet()) {
+ metadataMap.put(entry.getKey().name(), entry.getValue());
+ }
+
+ // Print the file metadata to log.
+ StringBuffer sb = new StringBuffer();
+ sb.append('\n');
+ for (Entry<String, Object> entry : metadataMap.entrySet()) {
+ sb.append(" " + entry.getKey() + " = " + entry.getValue() + '\n');
+ }
+ LOGGER.info("file metadata ..." + '\n' + sb.toString());
+
// Return the completed metadata map.
- return metaDataMap;
+ return metadataMap;
}
+
+ /**
+ * Calculate the trigger rate in KHz.
+ *
+ * @param firstTimestamp the first physics timestamp
+ * @param lastTimestamp the last physics timestamp
+ * @param physicsEvents the number of physics events
+ * @return the trigger rate calculation in KHz
+ */
+ private double calculateTriggerRate(Integer firstTimestamp, Integer lastTimestamp, int physicsEvents) {
+ return ((double) physicsEvents / ((double) lastTimestamp - (double) firstTimestamp)) / 1000.;
+ }
}
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileMetadataReader.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileMetadataReader.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileMetadataReader.java Tue Nov 10 15:21:05 2015
@@ -18,5 +18,5 @@
* @return the metadata map
* @throws IOException if there is an error reading the file
*/
- public Map<String, Object> getMetadata(File file) throws IOException;
+ Map<String, Object> getMetadata(File file) throws IOException;
}
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileSet.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileSet.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/FileSet.java Tue Nov 10 15:21:05 2015
@@ -14,14 +14,14 @@
*/
public class FileSet extends HashMap<DatasetFileFormat, List<File>> {
- public List<File> get(DatasetFileFormat format) {
+ List<File> get(DatasetFileFormat format) {
if (super.get(format) == null) {
this.put(format, new ArrayList<File>());
}
return super.get(format);
}
- public void addFile(DatasetFileFormat format, File file) {
+ void addFile(DatasetFileFormat format, File file) {
this.get(format).add(file);
}
}
Modified: java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/LcioMetadataReader.java
=============================================================================
--- java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/LcioMetadataReader.java (original)
+++ java/branches/jeremy-dev/crawler/src/main/java/org/hps/crawler/LcioMetadataReader.java Tue Nov 10 15:21:05 2015
@@ -21,7 +21,7 @@
*/
public class LcioMetadataReader implements FileMetadataReader {
- /*
+ /**
* Setup the conditions system in dummy mode.
*/
static {
Modified: java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsData.java
=============================================================================
--- java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsData.java (original)
+++ java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsData.java Tue Nov 10 15:21:05 2015
@@ -281,7 +281,7 @@
EpicsData epicsData = null;
// Is this an EPICS event?
- if (EventTagConstant.EPICS.equals(evioEvent)) {
+ if (EventTagConstant.EPICS.matches(evioEvent)) {
// Find the bank with the EPICS data string.
final BaseStructure epicsBank = EvioBankTag.EPICS_STRING.findBank(evioEvent);
Modified: java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsEvioProcessor.java
=============================================================================
--- java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsEvioProcessor.java (original)
+++ java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/epics/EpicsEvioProcessor.java Tue Nov 10 15:21:05 2015
@@ -45,7 +45,7 @@
public void process(final EvioEvent evioEvent) {
// Is this an EPICS event?
- if (EventTagConstant.EPICS.equals(evioEvent)) {
+ if (EventTagConstant.EPICS.matches(evioEvent)) {
LOGGER.fine("processing EPICS event " + evioEvent.getEventNumber());
Modified: java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagConstant.java
=============================================================================
--- java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagConstant.java (original)
+++ java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagConstant.java Tue Nov 10 15:21:05 2015
@@ -63,7 +63,7 @@
return tag == this.tag;
}
- public boolean equals(final EvioEvent evioEvent) {
+ public boolean matches(final EvioEvent evioEvent) {
return evioEvent.getHeader().getTag() == this.tag;
}
Added: java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagMask.java
=============================================================================
--- java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagMask.java (added)
+++ java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagMask.java Tue Nov 10 15:21:05 2015
@@ -0,0 +1,40 @@
+package org.hps.record.evio;
+
+/**
+ * Event tag mask for physics and sync events.
+ * @author Jeremy McCormick, SLAC
+ */
+public enum EventTagMask {
+
+ /** Sync event with scalers and/or trigger config. */
+ SYNC(0x40),
+ /** Physics events. */
+ PHYSICS(0x80);
+
+ /**
+ * Define an event tag with a mask.
+ * @param mask the bit mask value
+ */
+ EventTagMask(int mask) {
+ this.mask = mask;
+ }
+
+ private int mask;
+
+ /**
+ * Get the tag's mask value.
+ * @return the tag's mask value
+ */
+ public int getMask() {
+ return mask;
+ }
+
+ /**
+ * Return <code>true</code> if the <code>eventTag</code> matches this mask.
+ * @param eventTag the event tag value from the EVIO header
+ * @return <code>true</code> if <code>eventTag</code> matches this mask
+ */
+ public boolean matches(int eventTag) {
+ return (eventTag & mask) > 0;
+ }
+}
Modified: java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EvioBankTag.java
=============================================================================
--- java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EvioBankTag.java (original)
+++ java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EvioBankTag.java Tue Nov 10 15:21:05 2015
@@ -25,8 +25,10 @@
/** Scaler data bank. */
SCALERS(57621),
/** Trigger configuration bank. */
- TRIGGER_CONFIG(0xE10E);
-
+ TRIGGER_CONFIG(0xE10E),
+ /** TI trigger bank. */
+ TI_TRIGGER(0xe10a);
+
/**
* The bank's tag value.
*/
@@ -46,7 +48,7 @@
*
* @param startBank the starting bank
* @return the first bank matching the tag or <code>null<code> if not found
- */
+ */
public BaseStructure findBank(final BaseStructure startBank) {
BaseStructure foundBank = null;
if (this.equals(startBank)) {
@@ -60,8 +62,8 @@
}
}
return foundBank;
- }
-
+ }
+
/**
* Get the bank tag value.
*
Copied: java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/triggerbank/TriggerType.java (from r3945, java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagBitMask.java)
=============================================================================
--- java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/evio/EventTagBitMask.java (original)
+++ java/branches/jeremy-dev/record-util/src/main/java/org/hps/record/triggerbank/TriggerType.java Tue Nov 10 15:21:05 2015
@@ -1,112 +1,86 @@
-package org.hps.record.evio;
+package org.hps.record.triggerbank;
import java.util.HashSet;
import java.util.Set;
+import org.hps.record.triggerbank.AbstractIntData.IntBankDefinition;
+import org.jlab.coda.jevio.BaseStructure;
import org.jlab.coda.jevio.EvioEvent;
/**
- * Encapsulates bit mask values for different types of physics events as described at
+ * Provides bit mask checks for the trigger types defined in
* <a href="https://confluence.slac.stanford.edu/display/hpsg/EVIO+Data+Format#EVIODataFormat-EVIOEventtypes-2015DataSet">EVIO Event types</a>.
*
- * @author <a href="mailto:[log in to unmask]">Jeremy McCormick</a>
+ * @author Jeremy McCormick, SLAC
*/
-public enum EventTagBitMask {
-
- /** LED or Cosmic trigger. */
- LED_COSMIC(4),
+public enum TriggerType {
+
+ /** LED or Cosmic trigger (sometimes called calibration also). */
+ LED_COSMIC(28),
/** Pair 0 trigger. */
- PAIRS0(2),
+ PAIRS0(26),
/** Pair 1 trigger. */
- PAIRS1(3),
- /** Physics event. */
- PHYSICS(7), // FIXME: Doesn't work!
+ PAIRS1(27),
/** Pulser triggered event. */
- PULSER(5),
+ PULSER(29),
/** Single 0 trigger. */
- SINGLE0(0),
+ SINGLES0(24),
/** Single 1 trigger. */
- SINGLE1(1),
- /** Physics sync event. */
- SYNC(6);
-
+ SINGLES1(25);
+
/**
* The bit number.
*/
private int bit;
/**
- * The bit mask.
+ * Constructor with bit number which is used to shift the input TI bits.
+ * @param bit the bit number for shifting the TI bits
*/
- private int bitMask;
-
- /**
- * Constructor with bit number.
- *
- * @param bit the bit number
- */
- private EventTagBitMask(final int bit) {
+ private TriggerType(final int bit) {
this.bit = bit;
- this.bitMask = 1 >> this.bit;
}
/**
- * Get the bit number.
- *
+ * Get the bit number.
* @return the bit number
*/
public int getBit() {
return this.bit;
}
-
+
/**
- * Get the bit mask.
- *
- * @return the bit mask
+ * Return <code>true</code> if the bits match this mask.
+ * @param triggerBits the trigger bits from the TI bank
+ * @return <code>true</code> if the bits match this mask
*/
- public int getBitMask() {
- return this.bitMask;
- }
-
- /**
- * Return <code>true</code> if the event's tag matches this mask.
- *
- * @param event an <code>EvioEvent</code> with tag to check against this mask
- * @return <code>true</code> if the event's tag matches this mask
- */
- public boolean equals(final EvioEvent event) {
- return equals(event.getHeader().getTag());
- }
-
- /**
- * Return <code>true</code> if the tag matches this mask.
- *
- * @param eventTag the event's tag from the header bank
- * @return <code>true</code> if the tag matches this mask
- */
- public boolean equals(final int eventTag) {
- return (eventTag & this.bitMask) == 1;
+ public boolean matches(final int triggerBits) {
+ return ((triggerBits >> this.bit) & 1) == 1;
}
- public static Set<EventTagBitMask> getEventTagBitMasks(EvioEvent evioEvent) {
- Set<EventTagBitMask> bitMasks = new HashSet<EventTagBitMask>();
- if (LED_COSMIC.equals(evioEvent)) {
- bitMasks.add(LED_COSMIC);
- } if (PAIRS0.equals(evioEvent)) {
- bitMasks.add(PAIRS0);
- } if (PAIRS1.equals(evioEvent)) {
- bitMasks.add(PAIRS1);
- } if (PHYSICS.equals(evioEvent)) {
- bitMasks.add(PHYSICS);
- } if (PULSER.equals(evioEvent)) {
- bitMasks.add(PULSER);
- } if (SINGLE0.equals(evioEvent)) {
- bitMasks.add(SINGLE0);
- } if (SINGLE1.equals(evioEvent)) {
- bitMasks.add(SINGLE1);
- } if (SYNC.equals(evioEvent)) {
- bitMasks.add(SYNC);
+ /**
+ * Definition of the TI bank in the EVIO event.
+ */
+ private static IntBankDefinition TI_BANK = new IntBankDefinition(TIData.class, new int[] {0x2e, 0xe10a});
+
+ /**
+ * Get the applicable trigger types from the TI data in an EVIO event.
+ * @param evioEvent the input EVIO event with the TI data
+ * @return the set of matching trigger types for the event
+ */
+ public static Set<TriggerType> getTriggerTypes(EvioEvent evioEvent) {
+ Set<TriggerType> matches = new HashSet<TriggerType>();
+ BaseStructure tiBank = TI_BANK.findBank(evioEvent);
+ if (tiBank != null) {
+ int[] triggerData = tiBank.getIntData();
+ if (triggerData != null) {
+ for (TriggerType triggerType : TriggerType.values()) {
+ if (triggerType.matches(triggerData[0])) {
+ matches.add(triggerType);
+ }
+ }
+ }
}
- return bitMasks;
- }
+ return matches;
+ }
}
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