Commit in lcsim/src/org/lcsim on MAIN
math/chisq/ChisqProb.java+9-91.2 -> 1.3
mc/CCDSim/CCDSim.java+8-41.3 -> 1.4
mc/fast/cluster/ronan/MCFastRonan.java+1-41.8 -> 1.9
recon/cluster/util/FixedConeClusterPropertyCalculator.java-41.2 -> 1.3
recon/vertexing/zvtop4/VectorArithmetic.java+1-11.7 -> 1.8
                      /ZvTop.java+2-21.22 -> 1.23
                      /ZvTrack.java+3-31.20 -> 1.21
                      /ZvVertex.java+1-11.3 -> 1.4
+25-28
8 modified files
Some trivial fixed to make javadoc run without errors or warnings

lcsim/src/org/lcsim/math/chisq
ChisqProb.java 1.2 -> 1.3
diff -u -r1.2 -r1.3
--- ChisqProb.java	19 Oct 2005 10:34:37 -0000	1.2
+++ ChisqProb.java	8 Nov 2005 17:04:31 -0000	1.3
@@ -3,7 +3,7 @@
  * for a system with <b> n </b>degrees of freedom would be exceeded by chance. Based on routines
  * in the book <em> "Numerical Recipes: The Art of Scientific Computing"</em>.
  * @author Norman Graf
- * @version $Id: ChisqProb.java,v 1.2 2005/10/19 10:34:37 jstrube Exp $
+ * @version $Id: ChisqProb.java,v 1.3 2005/11/08 17:04:31 tonyj Exp $
  *
  */
 
@@ -33,8 +33,8 @@
      *
      * This is the probability that the observed chi-square for a correct
      * model should be less than a value of chi-square.
-     *  @param a   : the number of degrees of freedom
-     *  @param x: the value of chi-squared
+     *  @param a the number of degrees of freedom
+     *  @param x the value of chi-squared
      *  @return The incomplete gamma function P(a, x).
      */
     public static double gammp(int a, double x)
@@ -72,8 +72,8 @@
      *
      * This is the probability that the observed chi-square
      * will exceed the value of chi-square by chance even for a correct model.
-     *  @param a   : the number of degrees of freedom
-     *  @param x: the value of chi-squared
+     *  @param a the number of degrees of freedom
+     *  @param x the value of chi-squared
      *  @return The incomplete gamma function Q(a, x)= 1 - P(a, x).
      */
     public static double gammq(int a, double x)
@@ -109,8 +109,8 @@
      * <i>x</i><sup><i>n</i></sup></td></tr></table>
      * </td></tr></table>
      *
-     *  @param a   : the number of degrees of freedom/2
-     *  @param x: the value of chi-squared/2
+     *  @param a the number of degrees of freedom/2
+     *  @param x the value of chi-squared/2
      *  @return The incomplete gamma P(a, x) evaluated by its series representation.
      */
     public static double gser(double a, double x)
@@ -177,8 +177,8 @@
      * &nbsp;&nbsp;&nbsp;(<i>x</i>  &gt;  0)</td></tr></table>
      * </td></tr></table>
      *
-     *  @param a   : the number of degrees of freedom/2
-     *  @param x: the value of chi-squared/2
+     *  @param a the number of degrees of freedom/2
+     *  @param x the value of chi-squared/2
      *  @return The incomplete gamma Q(a, x) evaluated by its continued fraction representation.
      */
     public static double gcf(double a, double x)

lcsim/src/org/lcsim/mc/CCDSim
CCDSim.java 1.3 -> 1.4
diff -u -r1.3 -r1.4
--- CCDSim.java	4 Oct 2005 18:53:41 -0000	1.3
+++ CCDSim.java	8 Nov 2005 17:04:31 -0000	1.4
@@ -6,13 +6,13 @@
 
 /**
  * A class to simulate the response of a ccd detector .
- * @author  sinev  U of Oregon, SLAC. x2970 <BR>
  *
  * Modifications:  June 3, 2003 - C programs created <BR> 
  *                 Dec. 3, 2003 - Java version N. A. Graf (stand alone) <BR> 
  *                 March 5,2004 - Nick Sinev, JAS version (hep.lcd....) <BR>
  *                 September 2005 - Nick Sinev, org.lcsim version <BR>
- * @version $Id: CCDSim.java,v 1.3 2005/10/04 18:53:41 sinev Exp $
+ * @author  sinev  U of Oregon, SLAC. x2970 <BR>
+ * @version $Id: CCDSim.java,v 1.4 2005/11/08 17:04:31 tonyj Exp $
 *    
 */
 public class CCDSim
@@ -484,8 +484,12 @@
 /**
  * Simulates high energy particle hit, using coordinates and directions
  * @param ccd  CCD class in which simulated digitized hit will be created
- * @param x,y,z <code>double</code> coordinates of original MC hit
- * @param ic,jc,kc <code>double</code> direction vectors of track at the crossing CCD point
+ * @param x <code>double</code> coordinate of original MC hit
+ * @param y <code>double</code> coordinate of original MC hit
+ * @param z <code>double</code> coordinate of original MC hit
+ * @param ic <code>double</code> direction vector of track at the crossing CCD point
+ * @param jc <code>double</code> direction vector of track at the crossing CCD point
+ * @param kc <code>double</code> direction vector of track at the crossing CCD point
  * @return 1 if success, -1 if filed (wrong input )
  */
     public int simTrack(CCD ccd, double x, double y, double z, double ic, double jc, double kc)

lcsim/src/org/lcsim/mc/fast/cluster/ronan
MCFastRonan.java 1.8 -> 1.9
diff -u -r1.8 -r1.9
--- MCFastRonan.java	24 Sep 2005 01:21:16 -0000	1.8
+++ MCFastRonan.java	8 Nov 2005 17:04:32 -0000	1.9
@@ -12,13 +12,10 @@
 import org.lcsim.event.MCParticle;
 import org.lcsim.util.Driver;
 
-
-
-
 /**
  * Fast Monte Carlo cluster simulator
  * @author M.Ronan  Oct 2000 - Added "refined" cluster simulation
- * @version
+ * @version $Id: MCFastRonan.java,v 1.9 2005/11/08 17:04:32 tonyj Exp $
  */
 public class MCFastRonan extends Driver implements ConditionsListener
 {

lcsim/src/org/lcsim/recon/cluster/util
FixedConeClusterPropertyCalculator.java 1.2 -> 1.3
diff -u -r1.2 -r1.3
--- FixedConeClusterPropertyCalculator.java	2 Aug 2005 17:18:04 -0000	1.2
+++ FixedConeClusterPropertyCalculator.java	8 Nov 2005 17:04:32 -0000	1.3
@@ -38,10 +38,6 @@
      * Fully qualified constructor
      *
      * @param   decoder  The CalorimeterIDDecoder used for indexing
-     * @param   vec   The Lorentz four-vector
-     * @param   members  A Vector of CalorimeterHits
-     * @param   layers  The number of layers in the Calorimeter
-     * @param   samplingFraction The conversion from measured to deposited energy
      */
 	public FixedConeClusterPropertyCalculator(CalorimeterIDDecoder decoder)
 	{

lcsim/src/org/lcsim/recon/vertexing/zvtop4
VectorArithmetic.java 1.7 -> 1.8
diff -u -r1.7 -r1.8
--- VectorArithmetic.java	31 Aug 2005 07:39:19 -0000	1.7
+++ VectorArithmetic.java	8 Nov 2005 17:04:32 -0000	1.8
@@ -15,7 +15,7 @@
 /**
  * Class to perform basic vector arithmetic on Hep3Vectors
  * @author jstrube
- * @version
+ * @version $Id: VectorArithmetic.java,v 1.8 2005/11/08 17:04:32 tonyj Exp $
  */
 final public class VectorArithmetic {
 

lcsim/src/org/lcsim/recon/vertexing/zvtop4
ZvTop.java 1.22 -> 1.23
diff -u -r1.22 -r1.23
--- ZvTop.java	25 Oct 2005 17:55:00 -0000	1.22
+++ ZvTop.java	8 Nov 2005 17:04:32 -0000	1.23
@@ -354,8 +354,8 @@
 
     /**
      * Finds the Maxima
-     * @param list
-     * @return
+     * @param list List of tracks
+     * @return The list of vertices
      */
     public List<ZvVertex> findVertices(List<Track> list) {
         trackList.clear();

lcsim/src/org/lcsim/recon/vertexing/zvtop4
ZvTrack.java 1.20 -> 1.21
diff -u -r1.20 -r1.21
--- ZvTrack.java	13 Sep 2005 09:32:51 -0000	1.20
+++ ZvTrack.java	8 Nov 2005 17:04:32 -0000	1.21
@@ -188,7 +188,7 @@
     /**
      * returns the parameter by index
      * 
-     * @deprecated, because the order is arbitrary
+     * @deprecated because the order is arbitrary
      * @param i
      *            <em>Index</em> of the parameter
      * @return the parameter
@@ -201,7 +201,7 @@
     /**
      * returns an array of parameters
      * 
-     * @deprecated, because the order is arbitrary
+     * @deprecated because the order is arbitrary
      * @return the parameters as double[]
      */
     @Deprecated
@@ -375,7 +375,7 @@
      * Projection of the parabolic approximation of the track into the x-y plane
      * Useful for visualization
      * 
-     * @see getTubeValue
+     * @see #getTubeValue(SpacePoint)
      * @param location
      *            The spatial position at which to evaluate the "track
      *            probability" in the lab frame

lcsim/src/org/lcsim/recon/vertexing/zvtop4
ZvVertex.java 1.3 -> 1.4
diff -u -r1.3 -r1.4
--- ZvVertex.java	16 Aug 2005 19:52:04 -0000	1.3
+++ ZvVertex.java	8 Nov 2005 17:04:32 -0000	1.4
@@ -29,7 +29,7 @@
  * NOTE: An unfitted vertex can share tracks with another vertex !
  * TODO pruning <-> fitting
  * @author J. Strube
- * @version
+ * @version $Id: ZvVertex.java,v 1.4 2005/11/08 17:04:32 tonyj Exp $
  */
 // -------------------------------------------------------------------------
 public class ZvVertex extends SpacePoint {
CVSspam 0.2.8