diff -u -r1.1 -r1.2
--- AbstractStrategyBuilder.java	26 Sep 2008 23:36:07 -0000	1.1
+++ AbstractStrategyBuilder.java	3 Oct 2008 18:28:10 -0000	1.2
@@ -22,6 +22,10 @@

     public void setStrategyPrototype(String strategiesFile, int strategyNumber) {   
         setStrategyPrototype(StrategyXMLUtils.getStrategyListFromFile(new File(strategiesFile)).get(strategyNumber)); 
     }

+    
+    public void setStrategyPrototype(String strategiesFile) {
+        setStrategyPrototype(strategiesFile,0); 
+    }

 
     public void setLayerWeight(String layerWeightsFile){
         setLayerWeight(LayerWeight.getLayerWeightFromFile(new File(layerWeightsFile)));

diff -u -r1.2 -r1.3
--- IStrategyBuilder.java	26 Sep 2008 23:36:07 -0000	1.2
+++ IStrategyBuilder.java	3 Oct 2008 18:28:10 -0000	1.3
@@ -51,26 +51,55 @@

      * Sets the LayerWeight object of the strategy builder. A layer weight is 
      * used to treat certain layers preferentially. If no layer weight specified, 
      * the default layer weight will be used. 

-     * @param lw

+     * @param lw The LayerWeight object to use

      */
     public void setLayerWeight(LayerWeight lw); 

+    
+     /**
+     * Sets the LayerWeight object of the strategy builder. A layer weight is 
+     * used to treat certain layers preferentially. If no layer weight specified, 
+     * the default layer weight will be used. 
+     * @param layerWeightsFile A string representing the filename of an XML file representing a LayerWeight object
+     */

     public void setLayerWeight(String layerWeightsFile); 
     
     /**
      * Set the prototype for the generated strategies. The values for cutoffs
      * and such will be copied from the prototype. If not prototype is specified,
      * the default values for SeedStrategy will be used. 

-     * @param strategy

+     * @param strategy The SeedStrategyObject to use

      */
     public void setStrategyPrototype(SeedStrategy strategy); 

+    
+    /**
+     * Set the prototype for the generated strategies. The values for cutoffs
+     * and such will be copied from the prototype. If not prototype is specified,
+     * the default values for SeedStrategy will be used. 
+     * @param strategiesFile Filename of XML file containing a list of strategies
+     * @param strategyNumber The (0-indexed) number of the strategy to use as a prototype
+     */

     public void setStrategyPrototype(String strategiesFile, int strategyNumber); 
     
     /**

+     * Set the prototype for the generated strategies. The values for cutoffs
+     * and such will be copied from the prototype. If not prototype is specified,
+     * the default values for SeedStrategy will be used. 
+     * @param strategiesFile Filename of XML file containing a list of strategies. The first strategy will be used. 
+     */    
+    
+    public void setStrategyPrototype(String strategiesFile); 
+    /**

      * Set a starting strategy list. New strategies will only be generated for 
      * particles not already found by the starting strategy list. 

-     * @param startList

+     * @param startList a List of SeedStrategy's 

      */
     public void setStartingStrategyList(List<SeedStrategy> startList); 

+    
+     /**
+     * Set a starting strategy list. New strategies will only be generated for 
+     * particles not already found by the starting strategy list. 
+     * @param startList a file containing a number of SeedStrategies
+     */

     public void setStartingStrategyList(String startingStrategiesFile); 
     
     /**

@@ -98,8 +127,22 @@

      * 
      * If no filter is desired, AllPassFilter may be used. 
      * 

-     * @param filter

+     * @param filter An object implementing the IParticleFilter interface

      */
     public void setParticleFilter(IParticleFilter filter);

+    
+        /**
+     * Sets the particle filter applied to MCParticles during the processing step. 
+     * MCParticles which do not pass this filter will not be considered for
+     * strategy finding. Note that MCParticles must also pass the MinLayers 
+     * requirement regardless of the filter.  
+     * 
+     * If no filter is specified, a filter will be generated from dca, z0 and
+     * pt cutoffs present in the prototype SeedStrategy. 
+     * 
+     * If no filter is desired, AllPassFilter may be used. 
+     * 
+     * @param filter Fully qualified class name for an object implementing the IParticleFilter interface
+     */

     public void setParticleFilter(String filterClassName); 
 }