Sorry, yes it's working now on the 64-bit machines. On Nov 12, 2012, at 11:56 AM, "McCormick, Jeremy I." <[log in to unmask]> wrote: > Hi, Matt. > > Did you try running this on 64-bit? Does it make a difference? > > Since all batch machines at SLAC are now 64-bit, I would switch to using them by default. The 32-bit > machines are deprecated and only kept around for legacy use (e.g. BaBar). > > --Jeremy > > On Nov 9, 2012, at 2:13 PM, "McCormick, Jeremy I." <[log in to unmask]> wrote: > >> Hi, Matt. >> >> Do you know how to look at memory usage in Java? >> >> You'll might want to debug with something like this: >> >> ---- >> >> Runtime runtime = Runtime.getRuntime(); >> >> NumberFormat format = NumberFormat.getInstance(); >> >> StringBuilder sb = new StringBuilder(); >> long maxMemory = runtime.maxMemory(); >> long allocatedMemory = runtime.totalMemory(); >> long freeMemory = runtime.freeMemory(); >> >> sb.append("free memory: " + format.format(freeMemory / 1024) + "<br/>"); >> sb.append("allocated memory: " + format.format(allocatedMemory / 1024) + "<br/>"); >> sb.append("max memory: " + format.format(maxMemory / 1024) + "<br/>"); >> sb.append("total free memory: " + format.format((freeMemory + (maxMemory - allocatedMemory)) / 1024) + "<br/>"); >> >> ---- >> >> I took the above idea from here. >> >> http://stackoverflow.com/questions/74674/how-to-do-i-check-cpu-and-memory-usage-in-java >> >> You could make that a static method and call it at various points in TestRunEvioToLcio or within one of your drivers in the .lcsim file you're using. >> >> If memory is steadily increasing every event then this indicates some systematic memory leak. If it looks fine and then explodes on one event, >> that indicates some problem with the data of that event. For instance, there could be a bogus (very large) value that gets into an array size setting >> due to corrupted data (e.g. when size of something is read from a data block), which is often what happens to cause these kinds of problems. >> >> --Jeremy >> >> -----Original Message----- >> From: Graham, Mathew Thomas >> Sent: Friday, November 09, 2012 12:38 PM >> To: Uemura, Sho; Omar Moreno; Per Hansson >> Cc: McCormick, Jeremy I. >> Subject: OutOfMemory error in jevio? >> >> I'm trying to run over data (from a pretty pristine hps-java build) like this: >> java -Xmx2048m -cp hps-java/target/hps-java-1.2-SNAPSHOT-bin.jar org.lcsim.hps.evio.TestRunEvioToLcio -x steering/TestRunOfflineRecon.lcsim /nfs/slac/g/hps/mgraham/DarkPhoton/testrun_data/hps_001349.evio.0 -DoutputFile=recon.slcio -d HPS-TestRun-v3 >> >> >> and I get this... >> >> Exception in thread "main" java.lang.RuntimeException: java.io.IOException: Map failed >> at org.lcsim.hps.evio.TestRunEvioToLcio.main(TestRunEvioToLcio.java:188) >> Caused by: java.io.IOException: Map failed >> at sun.nio.ch.FileChannelImpl.map(FileChannelImpl.java:748) >> at org.jlab.coda.jevio.EvioReader.mapFile(EvioReader.java:323) >> at org.jlab.coda.jevio.EvioReader.<init>(EvioReader.java:178) >> at org.lcsim.hps.evio.TestRunEvioToLcio.main(TestRunEvioToLcio.java:186) >> Caused by: java.lang.OutOfMemoryError: Map failed >> at sun.nio.ch.FileChannelImpl.map0(Native Method) >> at sun.nio.ch.FileChannelImpl.map(FileChannelImpl.java:745) >> ... 3 more >> >> >> ... > ######################################################################## Use REPLY-ALL to reply to list To unsubscribe from the HPS-SOFTWARE list, click the following link: https://listserv.slac.stanford.edu/cgi-bin/wa?SUBED1=HPS-SOFTWARE&A=1