Commit in hps-java/src/main/java/org/lcsim/hps/recon/tracking on MAIN
HPSStripMaker.java+16-51.6 -> 1.7
Added debug output.

hps-java/src/main/java/org/lcsim/hps/recon/tracking
HPSStripMaker.java 1.6 -> 1.7
diff -u -r1.6 -r1.7
--- HPSStripMaker.java	29 Sep 2012 00:19:41 -0000	1.6
+++ HPSStripMaker.java	7 Nov 2012 20:54:27 -0000	1.7
@@ -44,6 +44,8 @@
     double _fourClusterErr = 1 / 2;
     double _fiveClusterErr = 1;
     
+    boolean _debug = false;
+    
     public HPSStripMaker(HPSClusteringAlgorithm algo) {
         _clustering = algo;
     }
@@ -174,6 +176,7 @@
     }
 
     private SiTrackerHitStrip1D makeTrackerHit(List<HPSFittedRawTrackerHit> cluster, SiSensorElectrodes electrodes) {
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " makeTrackerHit ");
         Hep3Vector position = getPosition(cluster, electrodes);
         SymmetricMatrix covariance = getCovariance(cluster, electrodes);
         double time = getTime(cluster);
@@ -184,17 +187,21 @@
             rth_cluster.add(bth.getRawTrackerHit());
         }
         SiTrackerHitStrip1D hit = new SiTrackerHitStrip1D(position, covariance, energy, time, rth_cluster, type);
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " SiTrackerHitStrip1D created at " + position + "(" + hit.getPositionAsVector().toString()+")" + " E " + energy + " time " + time);
         return hit;
     }
 
     private Hep3Vector getPosition(List<HPSFittedRawTrackerHit> cluster, SiSensorElectrodes electrodes) {
-        boolean debug = false;
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " getPosition for cluster size " + cluster.size());
         List<Double> signals = new ArrayList<Double>();
         List<Hep3Vector> positions = new ArrayList<Hep3Vector>();
 
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " Loop of " + cluster.size() + " and add signals and positions to vectors");
+        
         for (HPSFittedRawTrackerHit hit : cluster) {
             signals.add(hit.getAmp());
             positions.add(((SiStrips) electrodes).getStripCenter(_strip_map.get(hit)));
+            if(_debug) System.out.println(this.getClass().getSimpleName() + " Added hit with signal " + hit.getAmp() + " at strip center posiiton " + (((SiStrips) electrodes).getStripCenter(_strip_map.get(hit))));
         }
 
         // Average charge on central strips of longer clusters
@@ -214,6 +221,8 @@
             }
         }
 
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " Calculate charge weighted mean for " + signals.size() + " signals");
+        
         double total_charge = 0;
         Hep3Vector position = new BasicHep3Vector(0, 0, 0);
 
@@ -222,22 +231,24 @@
 
             total_charge += signal;
             position = VecOp.add(position, VecOp.mult(signal, positions.get(istrip)));
+            if(_debug) System.out.println(this.getClass().getSimpleName() + "strip " + istrip+": signal " + signal + " position " + positions.get(istrip) + " -> total_position " + position.toString() + " ( total charge " + total_charge + ")");
+            
         }
         position = VecOp.mult(1 / total_charge, position);
-        if(debug) System.out.println(this.getClass().getSimpleName() + " charge weighted position "+position.toString() + " (before trans)");
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " charge weighted position "+position.toString() + " (before trans)");
         electrodes.getParentToLocal().inverse().transform(position);
-        if(debug) System.out.println(this.getClass().getSimpleName() + " charge weighted position "+position.toString() + " (after trans)");
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " charge weighted position "+position.toString() + " (after trans)");
         
         // Swim position back through lorentz drift direction to midpoint between bias surfaces
         if(_simulation!=null) {
             _simulation.setSensor((SiSensor) electrodes.getDetectorElement());
             _simulation.lorentzCorrect(position, electrodes.getChargeCarrier());
-            if(debug) System.out.println(this.getClass().getSimpleName() + ": Position " + position.toString() + " ( after Lorentz)");
+            if(_debug) System.out.println(this.getClass().getSimpleName() + ": Position " + position.toString() + " ( after Lorentz)");
         }
         
         // return position in global coordinates
         Hep3Vector newpos = ((SiSensor) electrodes.getDetectorElement()).getGeometry().getLocalToGlobal().transformed(position);
-        if(debug) System.out.println(this.getClass().getSimpleName() + " newpos "+newpos.toString());
+        if(_debug) System.out.println(this.getClass().getSimpleName() + " final cluster position "+newpos.toString());
         
         return ((SiSensor) electrodes.getDetectorElement()).getGeometry().getLocalToGlobal().transformed(position);
 //        return electrodes.getLocalToGlobal().transformed(position);
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