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Then copy the LCDD schemas and GDML schemas to the same directory and point to that. Odd, I thought it worked for me (latest ilcinstall from SVN). On Thu, 7 Nov 2013, Kyle McCarty wrote: > Hello all, > > It still seems to be having trouble. I had the scripts I am passing to the > batch system perform the following commands as a diagnostic: > > echo $GDML_SCHEMA_DIR > ls $GDML_SCHEMA_DIR > > It gives as output > > /net/home/mccaky/hps/SimDist/v00-00/geant4/9.6.p01/source/persistency/gdml/schema/ > gdml_core.xsd > gdml_define.xsd > gdml_extensions.xsd > gdml_materials.xsd > gdml_parameterised.xsd > gdml_replicas.xsd > gdml_solids.xsd > gdml.xsd > > It is definitely recognizing the correct path and the schemas from the link > Sho provided are all there. However it gives the error: > > unable to connect socket for URL ' > http://www.lcsim.org/schemas/lcdd/1.0/lcdd.xsd' > > It seems to need a schema that is neither in the directory nor in the link > Sho provided. Note that this schema does exist, but in the directory > "v00-00/lcdd/v03-02-00_pre1/schemas/lcdd/1.0/". Also, just to check that > this is not the issue, do I have an old version of SLIC that and the schema > setup has changed? I am using SLIC version 3.1.1 and GEANT4 version 9.6.1. > > Thanks, > > Kyle > > > On Thu, Nov 7, 2013 at 12:46 AM, Graf, Norman A. <[log in to unmask]>wrote: > >> Thanks Sho. >> Kyle, can you let us know whether this resolves your batch >> issue? >> Norman >> >> ________________________________________ >> From: Sho Uemura [[log in to unmask]] >> Sent: Wednesday, November 06, 2013 9:39 PM >> To: Graf, Norman A. >> Cc: McCormick, Jeremy I.; Kyle McCarty; hps-software >> Subject: RE: Running SLIC Locally >> >> Done. I noticed the GDML schemas are already part of the ilcinstall tree, >> so it's actually a one-liner assuming you're using ilcinstall, but I kept >> the existing instructions and you can decide whether to keep them: >> >> >> https://confluence.slac.stanford.edu/display/ilc/How+can+I+make+SLIC+look+for+XML+schemas+in+a+local+directory >> >> On Wed, 6 Nov 2013, Graf, Norman A. wrote: >> >>> Hello Sho, >>> Thanks for looking into this. Feel free to update the >>> confluence page. >>> Norman >>> >>> ________________________________________ >>> From: Sho Uemura [[log in to unmask]] >>> Sent: Wednesday, November 06, 2013 6:46 PM >>> To: McCormick, Jeremy I. >>> Cc: Kyle McCarty; Graf, Norman A.; hps-software >>> Subject: Re: Running SLIC Locally >>> >>> The Confluence instructions seem to be out of date: ilcinstall pulls in >>> and installs the LCDD schemas locally, so there's no need to download >>> those, but you do need to download the GDML schemas (I imagine it would >>> make sense for ilcinstall to do this as well, but it doesn't seem to). >>> >>> So download all the .xsd files under >>> http://www.lcsim.org/schemas/gdml/1.0/ into a local directory, then set >>> GDML_SCHEMA_DIR to point to this directory. This is all I need to do to >>> get slic running behind the JLab firewall. >>> >>> On Tue, 5 Nov 2013, McCormick, Jeremy I. wrote: >>> >>>> Alright I will double check that it is still working in my local copy... >>>> >>>> On Nov 5, 2013, at 11:16 AM, "Kyle McCarty" <[log in to unmask]<mailto: >> [log in to unmask]>> wrote: >>>> >>>> Hello Jeremy, >>>> >>>> Running the command " find /net/data/taro/kylem/schema/ -name "*.xsd" " >> gives >>>> >>>> /net/data/taro/kylem/schema/lcdd_iddict.xsd >>>> /net/data/taro/kylem/schema/lcdd_fields.xsd >>>> /net/data/taro/kylem/schema/lcdd_limits.xsd >>>> /net/data/taro/kylem/schema/lcdd_display.xsd >>>> /net/data/taro/kylem/schema/lcdd_sensitive_detectors.xsd >>>> /net/data/taro/kylem/schema/lcdd.xsd >>>> /net/data/taro/kylem/schema/lcdd_header.xsd >>>> /net/data/taro/kylem/schema/lcdd_regions.xsd >>>> >>>> I believe that batch system can access the folder. It writes the output >> log files (like the ones I sent previously) to the same driver (though a >> different folder), so it does seem to be able to read/write to said drive. >> Also, the schema folder has read/execute permissions for all user groups, >> so there shouldn't be any permission issues. The schema files themselves >> only had read access for all user groups. I gave execute access to all user >> groups for these as well, but this does not stop the errors. I'm fairly >> certain that the batch system is running the processes as me anyway, >> though, since it can write to an output folder which only I have write >> access for. >>>> >>>> - Kyle >>>> >>>> >>>> On Tue, Nov 5, 2013 at 1:31 PM, McCormick, Jeremy I. < >> [log in to unmask]<mailto:[log in to unmask]>> wrote: >>>> Hi, Kyle. >>>> >>>> Sorry you?re having troubles with this... >>>> >>>> Can you execute this command to show the contents of your schema dir? >>>> >>>> find /net/data/taro/kylem/schema/ -name ?*.xsd? >>>> >>>> Please paste that command output into an email back to us. >>>> >>>> Stupid question: Is that directory accessible to the batch system? >>>> >>>> Thanks. >>>> >>>> On Nov 5, 2013, at 8:50 AM, Kyle McCarty <[log in to unmask]<mailto: >> [log in to unmask]>> wrote: >>>> >>>> Hello Norman, >>>> >>>> The batch system we use is OpenPBS and works by submitting a shell >> script to the batch system, which then distributes the process to a node. I >> have attached a sample script that gets passed to the batch system as well >> as the stdout and stderr that came from running it. The variable >> GDML_SCHEMA_DIR correctly resolves as "/net/data/taro/kylem/schema/" which >> contains all of the XSD files. >>>> >>>> Thanks, >>>> >>>> Kyle >>>> >>>> >>>> On Mon, Nov 4, 2013 at 1:45 PM, Graf, Norman A. < >> [log in to unmask]<mailto:[log in to unmask]>> wrote: >>>> Hello Kyle, >>>> As far as I know this should work. Can you provide more information >>>> on exactly how you are running slic, where the schemas are located >>>> locally and whether GDML_SCHEMA_DIR resolves correctly? >>>> Norman >>>> >>>> From: Kyle McCarty [mailto:[log in to unmask]<mailto:[log in to unmask]>] >>>> Sent: Monday, November 04, 2013 9:10 AM >>>> To: Graf, Norman A. >>>> Cc: hps-software >>>> Subject: Re: Running SLIC Locally >>>> >>>> Hello Norman, >>>> I tried your suggestion and I am still getting a similar problem. It >> now gives the error: >>>> >>>> fatal error: systemId: line: 0 column: 0 >>>> unable to connect socket for URL ' >> http://www.lcsim.org/schemas/gdml/1.0/gdml.xsd' >>>> fatal error: systemId: file:///net/home/mccaky/data/schema//lcdd.xsd >> line: 18 column: 80 >>>> fatal error during schema scan >>>> >>>> -------- EEEE ------- G4Exception-START -------- EEEE ------- >>>> *** G4Exception : >>>> issued by : >>>> Failed to get the world volume. >>>> *** Fatal Exception *** core dump *** >>>> -------- EEEE -------- G4Exception-END --------- EEEE ------- >>>> >>>> >>>> *** G4Exception: Aborting execution *** >>>> The file "lcdd.xsd" does exist at the indicated directory, so it seems >> that SLIC is having trouble finding it there, for some reason. >>>> - Kyle >>>> >>>> On Mon, Nov 4, 2013 at 11:53 AM, Graf, Norman A. < >> [log in to unmask]<mailto:[log in to unmask]>> wrote: >>>> Good Morning Kyle, >>>> Have you tried the following? >>>> >>>> >> https://confluence.slac.stanford.edu/display/ilc/How+can+I+make+SLIC+look+for+XML+schemas+in+a+local+directory >>>> >>>> Norman >>>> >>>> From: [log in to unmask]<mailto: >> [log in to unmask]> [mailto:[log in to unmask] >> <mailto:[log in to unmask]>] On Behalf Of Kyle McCarty >>>> Sent: Monday, November 04, 2013 8:51 AM >>>> To: hps-software >>>> Subject: Running SLIC Locally >>>> >>>> Hello hps-software, >>>> I am attempting to run SLIC on a computing cluster, but am running into >> trouble. The individual nodes in the cluster do not have access to the >> internet, and this renders SLIC unable to access a file " >> http://www.lcsim.org/schemas/lcdd/1.0/lcdd.xsd" and subsequently >> terminate. Is there a means by which I can get SLIC to not require an >> internet connection to run? >>>> Thanks, >>>> >>>> Kyle >>>> >>>> ________________________________ >>>> >>>> Use REPLY-ALL to reply to list >>>> >>>> To unsubscribe from the HPS-SOFTWARE list, click the following link: >>>> https://listserv.slac.stanford.edu/cgi-bin/wa?SUBED1=HPS-SOFTWARE&A=1 >>>> >>>> >>>> >>>> ________________________________ >>>> >>>> Use REPLY-ALL to reply to list >>>> >>>> To unsubscribe from the HPS-SOFTWARE list, click the following link: >>>> https://listserv.slac.stanford.edu/cgi-bin/wa?SUBED1=HPS-SOFTWARE&A=1 >>>> >>>> <egs_0.0025x0_450na_100kb_1000.sh< >> http://egs_0.0025x0_450na_100kb_1000.sh >>>> <egs_0.0025x0_450na_100kb_1000.sh.e98608><egs_0.0025x0_450na_100kb_1000.sh.o98608> >>>> >>>> >>>> >>>> ######################################################################## >>>> Use REPLY-ALL to reply to list >>>> >>>> To unsubscribe from the HPS-SOFTWARE list, click the following link: >>>> https://listserv.slac.stanford.edu/cgi-bin/wa?SUBED1=HPS-SOFTWARE&A=1 >>>> >>> ######################################################################## >>> Use REPLY-ALL to reply to list >>> >>> To unsubscribe from the HPS-SOFTWARE list, click the following link: >>> https://listserv.slac.stanford.edu/cgi-bin/wa?SUBED1=HPS-SOFTWARE&A=1 >>> >> > > ######################################################################## > Use REPLY-ALL to reply to list > > To unsubscribe from the HPS-SOFTWARE list, click the following link: > https://listserv.slac.stanford.edu/cgi-bin/wa?SUBED1=HPS-SOFTWARE&A=1 > ######################################################################## Use REPLY-ALL to reply to list To unsubscribe from the HPS-SOFTWARE list, click the following link: https://listserv.slac.stanford.edu/cgi-bin/wa?SUBED1=HPS-SOFTWARE&A=1