diff -u -r1.3 -r1.4
--- EtEventProcessor.java	4 Oct 2013 06:02:19 -0000	1.3
+++ EtEventProcessor.java	5 Nov 2013 17:15:04 -0000	1.4
@@ -5,70 +5,145 @@

 import org.jlab.coda.et.EtEvent;
 import org.jlab.coda.et.exception.EtTimeoutException;
 

+/**
+ * This is an interface for processing EtEvent objects and receiving callbacks
+ * via an {@link EtEventListener}.
+ * @author Jeremy McCormick <[log in to unmask]>
+ * @version $Id: EtEventProcessor.java,v 1.4 2013/11/05 17:15:04 jeremy Exp $
+ */

 interface EtEventProcessor
 {

-    // Process a single EtEvent.

+    /** 
+     * Process a single EtEvent.
+     * @param event The ET event.
+     * @throws EventProcessingException if there was an error processing the event.
+     * @throws MaxEventsException if the maximum number of events was reached or exceeded.
+     */

     void processEtEvent(EtEvent event) throws EventProcessingException, MaxEventsException;
     

-    // Process the next array of EtEvents.  This method may block for a long time or forever.
-    // The default implementation calls processEtEvent() on each event, but this is not required.

+    /**
+     * Process the next array of EtEvents.  This method may block for a long time or forever.
+     * The default implementation calls processEtEvent() on each event, but this is not required.
+     * @throws EtTimeoutException if the connection times out.
+     * @throws MaxEventsException if the maximum number of events was reached or exceeded.
+     * @throws EventProcessingException if there was an error processing events.
+     * @throws Exception if some other exception occurs.
+     */

     void processEtEvents() throws EtTimeoutException, MaxEventsException, EventProcessingException, Exception;
     

-    // Process all incoming EtEvents until ET system goes down or stop is requested.

+    /** 
+     * Process all incoming EtEvents until ET system goes down or stop is requested.
+     */

     void process();
     

-    // Get the current status.

+    /**
+     * Get the current status as a {@link ConnectionStatus} code.
+     */

     int getStatus();
     

-    // Total number of events processed, including those with errors.

+    /** 
+     * Get the total number of events processing thusfar, including those with errors.
+     * @return The number of events processed.
+     */

     int getNumberOfEventsProcessed();
     

-    // Max events to process.

+    /**
+     * Get the maximum number of event to process before automatically disconnecting.
+     * @return The maximum number of events to process.
+     */

     int getMaxEvents();
     

-    // Reset the number of events processed.

+    /**
+     * Reset the number of events processed to zero.
+     */

     void resetNumberOfEventsProcessed();
     

-    // Add a callback object that will receive notification of start, end, and error.

+    /**
+     * Add a listener that will receive notifications during event processing.
+     * @param callme The ET event listener.
+     */

     void addListener(EtEventListener callme);
     

-    // Request that the processor stop processing events.

+    /**
+     * Request that the processor stop processing events.
+     */

     void stop();
     

-    // Set maximum number of events to process.

+    /**
+     * Set the maximum number of events to process before disconnecting.
+     * @param maxEvents The maximum number of events to process.
+     */

     void setMaxEvents(int maxEvents);
     

-    // Change to pause mode which allows pausing between events.

+    /**
+     * Turn pause mode on or off.
+     * @param p The pause mode setting; true for on; false for off.
+     */

     void pauseMode(boolean p);
     

-    // Continue with next events if in pause mode.

+    /**
+     * If using pause mode, this will get the next set of events and then pause again.
+     */

     void nextEvents();
     

-    // Set the log level.

+    /**
+     * Set the log level of this object.
+     * @param level The log level.
+     */

     void setLogLevel(Level level);
     

+    /**
+     * Check if the processor is done.
+     * @return True if processer is done processing events; false if not.
+     */

     boolean done();
     

+    /**
+     * Check if the processor is in the blocked state, e.g. if it is waiting 
+     * for events from the ET ring.
+     * @return True if blocked; false if not.
+     */

     boolean blocked();
            

-    // Exception that is thrown when an error occurs during event processing.

+    /** 
+     * Exception that is thrown when an error occurs during event processing.
+     */

     static class EventProcessingException extends Exception {
 

+        /**
+         * Class constructor.
+         * @param e Another Exception object.
+         */

         EventProcessingException(Exception e) {
             super(e);
         }
         

+        /**
+         * Class constructor.
+         * @param m The error message.
+         * @param e Another Exception object.
+         */

         EventProcessingException(String m, Exception e) {
             super(m, e);
         }
         

+        /**
+         * Class constructor.
+         * @param m The error message.
+         */

         EventProcessingException(String m) {
         	super(m);
         }
     }
     

-    // Exception that is thrown when max number of events is reached or exceeded.

+    /**
+     * Exception that is throw when the {@link EtEventProcessor#getMaxEvents()} is exceeded.
+     */

     static final class MaxEventsException extends Exception {

+        
+        /**
+         * Class constructor
+         */

         MaxEventsException() {
             super("Maximum number of events was reached.");
         }

diff -u -r1.16 -r1.17
--- JobPanel.java	5 Jun 2013 16:00:30 -0000	1.16
+++ JobPanel.java	5 Nov 2013 17:15:04 -0000	1.17
@@ -14,6 +14,11 @@

 import javax.swing.JTextField;
 import javax.swing.SwingUtilities;
 

+/**
+ * The panel for setting job parameters.
+ * @author Jeremy McCormick <[log in to unmask]>
+ * @version $Id: JobPanel.java,v 1.17 2013/11/05 17:15:04 jeremy Exp $
+ */

 class JobPanel extends FieldsPanel {
 
     private JTextField detectorNameField;

@@ -38,6 +43,9 @@

     final static int RESOURCE = 0;
     final static int FILE = 1;
     

+    /**
+     * The available LogLevel settings.
+     */

     String[] logLevels = new String[] {
         Level.ALL.toString(),
         Level.FINEST.toString(),

@@ -49,6 +57,9 @@

         Level.SEVERE.toString(),
         Level.OFF.toString()};
 

+    /**
+     * Class constructor.
+     */

     JobPanel() {
 
         super(new Insets(4, 2, 2, 4), true);

@@ -78,6 +89,10 @@

         setJobSettings(new JobSettings());
     }
     

+    /**
+     * Enable this component.
+     * @param enable Whether to enable or not.
+     */

     void enableJobPanel(boolean enable) {
         detectorNameField.setEnabled(enable);
         eventBuilderField.setEnabled(enable);

@@ -98,6 +113,9 @@

         eventBuilderField.addActionListener(listener);
     }
         

+    /**
+     * Choose a file name for the automatic AIDA save file.
+     */

     void chooseAidaAutoSaveFile() {
         JFileChooser fc = new JFileChooser();
         fc.setDialogTitle("Choose AIDA Auto Save File");

@@ -119,6 +137,10 @@

         }
     }
 

+    /**
+     * Check that the steering file or resource is valid.
+     * @return True if steering is valid; false if not.
+     */

     boolean checkSteering() {
         String steering = steeringFileField.getText();
         int steeringType = steeringTypeComboBox.getSelectedIndex();		

@@ -143,6 +165,10 @@

         }               
     }
      

+    /**
+     * Setup the event builder from the field setting.
+     * @return True if builder is setup successfully; false if not.
+     */

     void editEventBuilder() {
         String eventBuilderClassName = eventBuilderField.getText();
         boolean okay = true;

@@ -168,7 +194,9 @@

             resetEventBuilder();
     }
 

-

+    /**
+     * Reset the event builder to the default.
+     */

     private void resetEventBuilder() {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -177,10 +205,18 @@

         });
     }
 

+    /**
+     * Get the event builder class name.
+     * @return The event builder class name.
+     */

     String getEventBuilderClassName() {
         return eventBuilderField.getText();
     }
 

+    /**
+     * Set the steering file field.
+     * @param steeringFile The path to the file.
+     */

     void setSteeringFile(final String steeringFile) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -189,6 +225,10 @@

         });
     }
     

+    /**
+     * Set the steering file resource.
+     * @param s The resource path.
+     */

     void setSteeringResource(final String s) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -197,6 +237,10 @@

         });
     }
 

+    /**
+     * Set the name of the detector.
+     * @param detectorName The name of the detector.
+     */

     void setDetectorName(final String detectorName) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -205,6 +249,10 @@

         });
     }
 

+    /**
+     * Get the steering file or resource path from the field setting.
+     * @return The steering file or resource path.
+     */

     String getSteering() {
         if (getSteeringType() == FILE) {
             return steeringFileField.getText();

@@ -217,14 +265,26 @@

         }
     }
 

+    /**
+     * Get the type of steering, file or resource.
+     * @return The type of steering.
+     */

     int getSteeringType() {
         return steeringTypeComboBox.getSelectedIndex();
     }
 

+    /**
+     * Get the name of the detector.
+     * @return The name of the detector.
+     */

     String getDetectorName() {
         return detectorNameField.getText();
     }
 

+    /**
+     * 
+     * @param defaultEventBuilderClassName
+     */

     void setDefaultEventBuilder(final String defaultEventBuilderClassName) {
         this.defaultEventBuilderClassName = defaultEventBuilderClassName;
         SwingUtilities.invokeLater(new Runnable() {

@@ -234,10 +294,18 @@

         });
     }
 

+    /**
+     * Check if pause mode is selected.
+     * @return True if pause mode is enabled; false if not.
+     */

     boolean pauseMode() {
         return this.pauseModeCheckBox.isSelected();
     }
     

+    /**
+     * Set the pause mode.
+     * @param p The pause mode; true for on; false for off.
+     */

     void enablePauseMode(final boolean p) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -246,42 +314,82 @@

         });
     }
 

+    /**
+     * Get the log level from the combo box. 
+     * @return The log level.
+     */

     Level getLogLevel() {
         return Level.parse((String) logLevelComboBox.getSelectedItem());
     }
     

+    /**
+     * Get the disconnect on error setting from the check box.
+     * @return The disconnect on error setting.
+     */

     boolean disconnectOnError() {
         return disconnectOnErrorCheckBox.isSelected();
     }
     

+    /**
+     * Get the warn on disconnect setting.
+     * @return The warn on disconnect setting.
+     */

     boolean warnOnDisconnect() {
         return disconnectWarningCheckBox.isSelected();
     }
     

+    /**
+     * Get the log to file setting.
+     * @return The log to file setting.
+     */

     boolean logToFile() {
         return logCheckBox.isSelected();
     }
     

+    /**
+     * Get the log file name.
+     * @return The log file name.
+     */

     String getLogFileName() {
         return logFileField.getText();
     }    
     

+    /**
+     * Get whether the AIDA server is enabled.
+     * @return True if the AIDA server is enabled; false if not.
+     */

     boolean isAidaServerEnabled() {
         return remoteAidaCheckBox.isSelected();
     }
     

+    /**
+     * Get whether AIDA autosave is enabled.
+     * @return True if AIDA autosave is enabled; false if not.
+     */

     boolean isAidaAutoSaveEnabled() {
         return aidaSaveCheckBox.isSelected();
     }
     

+    /**
+     * Get the AIDA autosave file name.
+     * @return The AIDA autosave file name.
+     */

     String getAidaAutoSaveFileName() {
         return aidaSaveField.getText();
     }
     

+    /**
+     * Get the name of the remote AIDA server.
+     * @return The remote AIDA server name.
+     */

     String getRemoteAidaName() {
         return remoteAidaNameField.getText();
     }

-                    

+                  
+    /**
+     * Set whether to disconnect if errors occur.
+     * @param b The disconnect on error setting.
+     */

     private void setDisconnectOnError(final boolean b) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -290,6 +398,10 @@

         });        
     }
     

+    /**
+     * Set whether to warn before a disconnect occurs.
+     * @param b The warn before disconnect setting.
+     */

     private void setWarnBeforeDisconnect(final boolean b) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -298,6 +410,10 @@

         });            
     }
     

+    /**
+     * Set the steering type.
+     * @param t The steering type.
+     */

     void setSteeringType(final int t) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -306,6 +422,10 @@

         });        
     }
     

+    /**
+     * Set the log level.
+     * @param level The log level.
+     */

     private void setLogLevel(final Level level) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -314,6 +434,10 @@

         });               
     }
     

+    /**
+     * Set the fully qualified class name of the event builder.
+     * @param c The class name of the event builder.
+     */

     private void setEventBuilder(final String c) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -322,6 +446,10 @@

         });        
     }
     

+    /**
+     * Set whether to log to a file.
+     * @param b The log to file setting.
+     */

     void setLogToFile(final boolean b) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -330,6 +458,10 @@

         });        
     }
     

+    /**
+     * Set the log file name.
+     * @param s The log file name.
+     */

     void setLogFile(final String s) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -338,6 +470,10 @@

         });
     }
     

+    /**
+     * Set AIDA autosave.
+     * @param b The AIDA autosave setting.
+     */

     private void enableAidaAutoSave(final boolean b) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -346,6 +482,10 @@

         });
     }
     

+    /**
+     * Set the AIDA autosave file name.
+     * @param s The AIDA autosave file name.
+     */

     private void setAidaAutoSaveFileName(final String s) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -354,6 +494,10 @@

         });
     }
     

+    /**
+     * Enable remote AIDA.
+     * @param b The remote AIDA setting; true to enable; false to disable.
+     */

     private void enableRemoteAida(final boolean b) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -362,6 +506,10 @@

         });
     }
     

+    /**
+     * Set the name of the remote AIDA server.
+     * @param s The name of the remote AIDA server.
+     */

     private void setRemoteAidaName(final String s) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -370,16 +518,24 @@

         });
     }
     

+    /**
+     * Get the resource path for the steering file.
+     * @return The resource path for the steering file.
+     */

     private String getSelectedSteeringResource() {
         return (String) steeringResourcesComboBox.getSelectedItem();
     }
     

+    /**
+     * Get the path to the steering file path.
+     * @return The steering file path.
+     */

     private String getSteeringFile() {
         return steeringFileField.getText();
     }
             
     /**

-     * Gather JobSettings parameters from GUI and return a JobSettings object.

+     * Gather {@link JobSettings} parameters from GUI and return a JobSettings object.

      * @return The JobSettings from the JobPanel.
      */
     JobSettings getJobSettings() {

diff -u -r1.2 -r1.3
--- FieldsPanel.java	5 Jun 2013 15:59:57 -0000	1.2
+++ FieldsPanel.java	5 Nov 2013 17:15:04 -0000	1.3
@@ -14,8 +14,7 @@

 /**
  * This class is used to provide utility methods for the data panels in the application tabs.
  * @author Jeremy McCormick <[log in to unmask]>

- * @version $Id: FieldsPanel.java,v 1.2 2013/06/05 15:59:57 jeremy Exp $
- *

+ * @version $Id: FieldsPanel.java,v 1.3 2013/11/05 17:15:04 jeremy Exp $

  */
 public class FieldsPanel extends JPanel {
 

@@ -23,29 +22,67 @@

     private Insets insets;
     private boolean editable = false;
     

+    /**
+     * Class constructor.
+     * @param insets The insets for the panel.
+     * @param editable Editable setting.
+     */

     FieldsPanel(Insets insets, boolean editable) {
         this.insets = insets;
         this.editable = editable;
     }
     

+    /**
+     * Class constructor.
+     */

     FieldsPanel() {
         this.insets = new Insets(1, 1, 1, 1);
     }
     

+    /**
+     * Add a field.
+     * @param name The name of the field.
+     * @param size The size of the field.
+     * @return The JTextField component.
+     */

     protected final JTextField addField(String name, int size) {
         return addField(name, "", size, this.editable);
     }

-    

+
+    /**
+     * Add a field.
+     * @param name The name of the field.
+     * @param value The default value of the field.
+     * @param size The size of the field.
+     * @return The JTextField component.
+     */

     protected final JTextField addField(String name, String value, int size) {
         return addField(name, value, size, this.editable);
     }
     

+    /**
+     * Add a field.
+     * @param name The name of the field.
+     * @param value The default value of the field.
+     * @param tooltip The tooltip text.
+     * @param size The size of the field.
+     * @param editable The editable setting.
+     * @return The JTextField component.
+     */

     protected final JTextField addField(String name, String value, String tooltip, int size, boolean editable) {
         JTextField f = addField(name, value, size, editable);
         f.setToolTipText(tooltip);
         return f;
     }
     

+    /**
+     * Add a field.
+     * @param name The name of the field.
+     * @param value The default value of the field. 
+     * @param size The size of the field.
+     * @param editable The editable setting.
+     * @return The JTextField component.
+     */

     protected final JTextField addField(String name, String value, int size, boolean editable) {
         GridBagConstraints c = new GridBagConstraints();
         c.gridx = 0;

@@ -71,6 +108,12 @@

         return field;
     }
     

+    /**
+     * Add a combo box.
+     * @param name The name of the combo box.
+     * @param values The set of values for the combo box.
+     * @return The JComboBox component.
+     */

     protected final JComboBox addComboBox(String name, String[] values) {
         
     	//System.out.println("addComboBox = " + name);

@@ -100,6 +143,12 @@

         return combo;
     }
     

+    /**
+     * Add a multiline combo box.
+     * @param name The name of the combo box.
+     * @param values The values for the combo box.
+     * @return The JComboBox component.
+     */

     protected final JComboBox addComboBoxMultiline(String name, String[] values) {
         
         GridBagConstraints c = new GridBagConstraints();

@@ -130,12 +179,27 @@

         return combo;
     }
     

+    /**
+     * Add a check box.
+     * @param name The name of the check box.
+     * @param tooltip The tooltip text.
+     * @param selected Whether the box is selected or not.
+     * @param enabled Whether it is enabled or not.
+     * @return The JCheckBox component.
+     */

     protected final JCheckBox addCheckBox(String name, String tooltip, boolean selected, boolean enabled) {
         JCheckBox c = addCheckBox(name, selected, enabled);
         c.setToolTipText(tooltip);
         return c;
     }
     

+    /**
+     * Add a check box.
+     * @param name The name of the check box.
+     * @param selected Whether the check box is selected or not.
+     * @param enabled Whether it is enabled or not.
+     * @return The JCheckBox component.
+     */

     protected final JCheckBox addCheckBox(String name, boolean selected, boolean enabled) {
         
         GridBagConstraints c = new GridBagConstraints();

@@ -161,7 +225,11 @@

         return checkbox;
     }
     

+    /**
+     * Add an ActionListener to this component.  By default this does nothing, but 
+     * individual sub-components should attach this to individual components.
+     * @param listener The AcitonListener to add.
+     */

     void addActionListener(ActionListener listener) {

-        // By default this does nothing.  Sub-classes can assign the listener to individual components.

     }
 }

\ No newline at end of file

diff -u -r1.1 -r1.2
--- SteeringFileUtil.java	10 May 2012 21:14:53 -0000	1.1
+++ SteeringFileUtil.java	5 Nov 2013 17:15:04 -0000	1.2
@@ -13,12 +13,16 @@

  * This class provides a static utility method to get a list of steering file resources from the package in hps-java that contains these files.
  * 
  * @author Jeremy McCormick <[log in to unmask]>

- * @version $Id: SteeringFileUtil.java,v 1.1 2012/05/10 21:14:53 jeremy Exp $

+ * @version $Id: SteeringFileUtil.java,v 1.2 2013/11/05 17:15:04 jeremy Exp $

  */
 public class SteeringFileUtil {
 
     private static final String path = "org/lcsim/hps/steering/";
 

+    /**
+     * Get the files that end in .lcsim from all loaded jar files.
+     * @return
+     */

     public static String[] getAvailableSteeringFileResources() {
         List<String> resources = new ArrayList<String>();
         URL url = SteeringFileUtil.class.getResource("SteeringFileUtil.class");

diff -u -r1.2 -r1.3
--- ConnectionStatus.java	18 Apr 2012 21:06:54 -0000	1.2
+++ ConnectionStatus.java	5 Nov 2013 17:15:04 -0000	1.3
@@ -1,7 +1,15 @@

 package org.lcsim.hps.monitoring;
 

+/**
+ * Connection status setting.
+ * @author Jeremy McCormick <[log in to unmask]>
+ * @version $Id: ConnectionStatus.java,v 1.3 2013/11/05 17:15:04 jeremy Exp $
+ */

 final class ConnectionStatus
 {

+    /**
+     * The status codes.
+     */

     static final int DISCONNECTED = 0;
     static final int CONNECTED = 1;
     static final int CONNECTING = 2;

@@ -12,6 +20,9 @@

     static final int CONNECTION_REQUESTED = 7;
     static final int DISCONNECT_REQUESTED = 8;
     

+    /**
+     * The string descriptions for connection statuses.
+     */

     private static final String[] statuses = { 
         "DISCONNECTED", 
         "CONNECTED", 

@@ -23,8 +34,16 @@

         "CONNECTION REQUESTED",
         "DISCONNECT REQUESTED" };
     

+    /**
+     * Total number of statuses.
+     */

     static final int NUMBER_STATUSES = statuses.length;
     

+    /**
+     * Convert status setting to string.
+     * @param status The status setting.
+     * @return The status string.
+     */

     static String toString(int status) {
         return statuses[status].toUpperCase();
     }

diff -u -r1.23 -r1.24
--- ConnectionPanel.java	10 May 2012 21:14:53 -0000	1.23
+++ ConnectionPanel.java	5 Nov 2013 17:15:04 -0000	1.24
@@ -19,7 +19,7 @@

 
 /**
  * @author Jeremy McCormick <[log in to unmask]>

- * @version $Id: ConnectionPanel.java,v 1.23 2012/05/10 21:14:53 jeremy Exp $

+ * @version $Id: ConnectionPanel.java,v 1.24 2013/11/05 17:15:04 jeremy Exp $

  */
 class ConnectionPanel extends FieldsPanel {
 

@@ -43,6 +43,9 @@

         Mode.ASYNC.toString()
     };
 

+    /**
+     * Class constructor.
+     */

     ConnectionPanel() {
 
         //super(new Insets(1, 1, 1, 1), true);

@@ -69,6 +72,10 @@

         setConnectionParameters(new ConnectionParameters());
     }
 

+    /**
+     * Get the connection parameters.
+     * @return The connection parameters.
+     */

     ConnectionParameters getConnectionParameters() {
         connectionParameters = new ConnectionParameters();
         connectionParameters.etName = etNameField.getText();

@@ -87,6 +94,10 @@

         return connectionParameters;
     }
 

+    /**
+     * Get the current wait mode from the GUI selection.
+     * @return The wait mode.
+     */

     private Mode getWaitMode() {
         Mode mode = null;
         String sel = (String) waitComboBox.getSelectedItem();

@@ -100,6 +111,10 @@

         return mode;
     }
 

+    /**
+     * Set the wait mode and push to the GUI.
+     * @param waitMode The wait mode.
+     */

     private void setWaitMode(Mode waitMode) {
         if (waitMode == Mode.SLEEP) {
             waitComboBox.setSelectedIndex(0);

@@ -110,6 +125,10 @@

         }
     }
 

+    /**
+     * Set the connection parameters and push into the GUI.
+     * @param cn The connection parameters.
+     */

     private void setConnectionParameters(ConnectionParameters cn) {
         etNameField.setText(cn.etName);
         hostField.setText(cn.host);

@@ -127,6 +146,10 @@

         this.connectionParameters = cn;
     }
 

+    /**
+     * Enable or disable the connection panel GUI elements.
+     * @param e Set to true for enabled; false to disable.
+     */

     void enableConnectionPanel(boolean e) {
         etNameField.setEnabled(e);
         hostField.setEnabled(e);

@@ -143,6 +166,9 @@

         prescaleField.setEnabled(e);
     }
 

+    /**
+     * Save connection parameters to selected output file.
+     */

     void save() {
         JFileChooser fc = new JFileChooser();
         int r = fc.showSaveDialog(ConnectionPanel.this);

@@ -152,6 +178,9 @@

         }
     }
 

+    /**
+     * Load connection parameters from a selected file.
+     */

     void load() {
         JFileChooser fc = new JFileChooser();
         int r = fc.showOpenDialog(ConnectionPanel.this);

@@ -161,10 +190,17 @@

         }
     }
 

+    /**
+     * Reset the connection parameters.
+     */

     void reset() {
         setConnectionParameters(new ConnectionParameters());
     }
 

+    /**
+     * Write connection parameters to a file.
+     * @param file The output properties file.
+     */

     private void writePropertiesFile(File file) {
         Properties prop = new Properties();
         prop.setProperty("etName", etNameField.getText());

@@ -187,10 +223,18 @@

         }
     }
 

+    /**
+     * Show an error dialog.
+     * @param mesg The dialog message.
+     */

     private void showErrorDialog(String mesg) {
         JOptionPane.showMessageDialog(this, mesg);
     }
 

+    /**
+     * Set the wait mode.
+     * @param waitMode The wait mode.
+     */

     private void setWaitMode(String waitMode) {
         if (Mode.SLEEP.toString().equalsIgnoreCase(waitMode)) {
             waitComboBox.setSelectedIndex(0);

@@ -201,6 +245,10 @@

         }
     }
 

+    /**
+     * Load connection parameters from properties file.
+     * @param file The properties file.
+     */

     void loadPropertiesFile(File file) {
         Properties prop = new Properties();
         try {

diff -u -r1.15 -r1.16
--- EventPanel.java	10 May 2012 21:14:53 -0000	1.15
+++ EventPanel.java	5 Nov 2013 17:15:04 -0000	1.16
@@ -9,6 +9,11 @@

 import javax.swing.JTextField;
 import javax.swing.SwingUtilities;
 

+/**
+ * This is the GUI component for displaying event information in real time.
+ * @author Jeremy McCormick <[log in to unmask]>
+ * @version $Id: EventPanel.java,v 1.16 2013/11/05 17:15:04 jeremy Exp $
+ */

 class EventPanel extends FieldsPanel { 
 
     private JTextField eventCounterField; // number of events in this job

@@ -33,8 +38,12 @@

     private boolean updateEvent = true;
     
     private final static DecimalFormat rateFormat = new DecimalFormat("#.##");

+    

     final static SimpleDateFormat dateFormat = new SimpleDateFormat("MMMM-dd-yyyy HH:mm:ss");
  

+    /**
+     * Class constructor.
+     */

     EventPanel() {
         
         super(new Insets(5, 5, 5, 5), false);

@@ -55,14 +64,26 @@

         maxEventsField = addField("Max Events", "-1", 8);
     }
             

+    /**
+     * Get the event refresh rate.
+     * @return The event refresh rate.
+     */

     int getEventRefresh() {
     	return eventRefresh;
     }
     

+    /**
+     * Get the max events setting from its GUI component.
+     * @return The max events.
+     */

     int getMaxEvents() {
         return Integer.parseInt(maxEventsField.getText());
     }
     

+    /**
+     * Set the max events.
+     * @param maxEvents The max events.
+     */

     void setMaxEvents(final int maxEvents) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -71,6 +92,10 @@

         });
     }
     

+    /**
+     * Set the run number.
+     * @param runNumber The run number.
+     */

     void setRunNumber(final int runNumber) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -79,6 +104,10 @@

         });
     }
     

+    /**
+     * Set the number of events in the run.
+     * @param eventCount The number of events in the run.
+     */

     void setRunEventCount(final int eventCount) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -87,6 +116,10 @@

         });
     }
     

+    /**
+     * Set the run start time in milliseconds since the epoch (Unix time).
+     * @param millis The run start time.
+     */

     void setRunStartTime(final long millis) {
         final Date d = new Date(millis);
         SwingUtilities.invokeLater(new Runnable() {

@@ -96,6 +129,10 @@

         });
     }
     

+    /**
+     * Set the run end time in milliseconds.
+     * @param millis The run end time.
+     */

     void setRunEndTime(final long millis) {
         final Date d = new Date(millis);
         SwingUtilities.invokeLater(new Runnable() {

@@ -105,6 +142,9 @@

         });
     }
     

+    /**
+     * Check if the panel should be updated for this event.
+     */

     private void checkUpdateEvent() {
         updateEvent = ((eventCount % getEventRefresh()) == 0);
     }

@@ -116,6 +156,9 @@

         incrementEventCounts();
     }
     

+    /**
+     * Update the event counters.
+     */

     void updateEventCount() {
         ++eventCount;
         ++sessionSupplied;

@@ -126,6 +169,10 @@

         }
     }
     

+    /**
+     * Increment the event counts in the GUI.  This happens when the event
+     * is flagged for updating.
+     */

     private void incrementEventCounts() {
         Runnable r = new Runnable() {
             public void run() {

@@ -136,7 +183,10 @@

         };
         SwingUtilities.invokeLater(r);
     }

-    

+
+    /**
+     * Increment the number of bad events.
+     */

     void updateBadEventCount() {
     	++badEventCount;
     	SwingUtilities.invokeLater(new Runnable() {

@@ -146,6 +196,10 @@

     	});
     }
     

+    /**
+     * Update the average event rate.
+     * @param jobStartTime The start time of the job in milliseconds.
+     */

     void updateAverageEventRate(long jobStartTime) {
         if (updateEvent) {
             final double jobTime = System.currentTimeMillis() - jobStartTime;

@@ -160,7 +214,11 @@

             }
         }
     }

-            

+     
+    /**
+     * Set the elapsed time for the session in milliseconds.
+     * @param time The elapsed time.
+     */

     void setElapsedTime(final long time) {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -168,7 +226,11 @@

             }
         });       
     }

-           

+        
+    /**
+     * Set the event refresh rate.
+     * @param eventRefresh The event refresh rate.
+     */

     void setEventRefresh(final int eventRefresh) {
         this.eventRefresh = eventRefresh;
         SwingUtilities.invokeLater(new Runnable() {

@@ -178,6 +240,9 @@

         });                
     }
         

+    /**
+     * Reset all the event counts.
+     */

     synchronized void reset() {
         resetEventCount();
         resetBadEventCount();

@@ -185,6 +250,9 @@

         resetElapsedTime();
     }
 	    

+    /**
+     * Reset the event counter.
+     */

     private void resetEventCount() {
         eventCount = 0;
         SwingUtilities.invokeLater(new Runnable() {

@@ -194,6 +262,9 @@

         });  		
     }
 

+    /**
+     * Reset the elapsed time field.
+     */

     private void resetElapsedTime() {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -202,6 +273,9 @@

         });
     }   
 

+    /**
+     * Reset the average event rate.
+     */

     private void resetAverageEventRate() {
         SwingUtilities.invokeLater(new Runnable() {
             public void run() {

@@ -210,6 +284,9 @@

         });	
     }
 

+    /**
+     * Reset the bad event count.
+     */

     private void resetBadEventCount() {
         this.badEventCount = 0;
         SwingUtilities.invokeLater(new Runnable() {

@@ -219,6 +296,9 @@

         });
     }
 

+    /**
+     * Reset the session supplied events.
+     */

     void resetSessionSupplied() {
         this.sessionSupplied = 0;
         SwingUtilities.invokeLater(new Runnable() {

diff -u -r1.10 -r1.11
--- ConnectionStatusPanel.java	25 Oct 2013 23:10:06 -0000	1.10
+++ ConnectionStatusPanel.java	5 Nov 2013 17:15:04 -0000	1.11
@@ -16,6 +16,11 @@

 import javax.swing.SwingConstants;
 import javax.swing.SwingUtilities;
 

+/**
+ * This is the panel for showing the current connection status (connected, disconnected, etc.).
+ * @author Jeremy McCormick <[log in to unmask]>
+ * @version $Id: ConnectionStatusPanel.java,v 1.11 2013/11/05 17:15:04 jeremy Exp $
+ */

 class ConnectionStatusPanel extends JPanel {
 
     JTextField statusField;

@@ -24,6 +29,9 @@

     // Format for date field.
     private final SimpleDateFormat dateFormat = new SimpleDateFormat("MMMM-dd-yyyy HH:mm:ss");
 

+    /**
+     * Class constructor.
+     */

     ConnectionStatusPanel() {
         
         setLayout(new GridBagLayout());

@@ -99,6 +107,10 @@

         setStatus(ConnectionStatus.DISCONNECTED);
     }
 

+    /**
+     * Set the connection status.
+     * @param status The status code.
+     */

     void setStatus(final int status) {
         if (status < 0 || status > (ConnectionStatus.NUMBER_STATUSES - 1)) {
             throw new IllegalArgumentException("Invalid status argument: " + status);