--- java/trunk/integration-tests/src/test/java/org/hps/ReconClusterICTest.java	                        (rev 0)
+++ java/trunk/integration-tests/src/test/java/org/hps/ReconClusterICTest.java	2014-10-16 04:01:34 UTC (rev 1213)
@@ -0,0 +1,180 @@

+package org.hps;
+
+import java.io.File;
+import java.io.IOException;
+import java.net.URL;
+
+import junit.framework.TestCase;
+
+import org.hps.users.jeremym.MockDataChallengeDiagnosticDriver;
+import org.lcsim.event.Cluster;
+import org.lcsim.event.EventHeader;
+import org.lcsim.event.ReconstructedParticle;
+import org.lcsim.event.Track;
+import org.lcsim.job.AidaSaveDriver;
+import org.lcsim.job.JobControlManager;
+import org.lcsim.util.Driver;
+import org.lcsim.util.aida.AIDA;
+import org.lcsim.util.cache.FileCache;
+import org.lcsim.util.loop.LCSimLoop;
+
+/**
+ * This test runs the standard reconstruction on a small set of input events using
+ * the new clustering algorithm.
+ * 
+ * @author Holly Szumila <[log in to unmask]>
+ */
+public class ReconClusterICTest extends TestCase {
+
+    static final String fileLocation = "http://www.lcsim.org/test/hps-java/MockDataReconTest.slcio";
+    //static final String mockDataUrl = "http://www.slac.stanford.edu/~meeg/hps2/meeg/mock_data/tritrig-beam-tri_1-10_readout.slcio";
+    
+    static final String className = MockDataReconTest.class.getSimpleName();
+    static final File outputDir = new File("./target/test-output/" + className);
+    static final File outputFile = new File(outputDir.getAbsolutePath() + File.separator + className);
+    static final File reconFile = new File(outputFile.getAbsolutePath() + ".slcio");
+    static final File aidaFile = new File(outputFile.getAbsolutePath() + ".aida");    
+
+    static final String steeringResource = "/org/hps/steering/users/holly/MockReconClusterICTest.lcsim";
+    
+    // TODO: Get some values for these and add test assertions!
+    /*
+    static final int expectedReconstructedParticles = 0;
+    static final int expectedClusters = 0;
+    static final int expectedTracks = 0;
+    static final int expectedCalorimeterHits = 0;
+    static final int expectedMCParticles = 0;
+    */
+
+    static final String clusterCollectionName = "EcalClusters";
+    static final String reconstructedParticleCollectionName = "FinalStateParticles";
+    static final String trackCollectionName = "MatchedTracks";
+
+    AIDA aida = AIDA.defaultInstance();
+
+    public void setUp() {
+        // Delete files if they already exist.
+        if (reconFile.exists())
+            reconFile.delete();
+        if (aidaFile.exists())
+            aidaFile.delete();
+        
+        // Create output dir.
+        outputDir.mkdirs();
+        if (!outputDir.exists()) {
+            throw new RuntimeException("Failed to create test output dir.");
+        }
+    }
+    
+    public void testReconMockData() {
+
+        // Run the reconstruction over input events.
+        runRecon();
+
+        // Create the plots.
+        createPlots();
+
+        // Check the statistics of the plots.
+        //checkPlots();
+    }
+
+    private void runRecon() {
+        
+        System.out.println("caching file ...");
+        System.out.println(fileLocation);
+        
+        File mockDataFile = null;
+        try {
+            FileCache cache = new FileCache();
+            mockDataFile = cache.getCachedFile(new URL(fileLocation));
+        } catch (IOException e) {
+            throw new RuntimeException(e);
+        }
+
+        System.out.println("running recon using steering resource " + steeringResource);
+        JobControlManager jobManager = new JobControlManager();
+        jobManager.addVariableDefinition("outputFile", outputFile.getPath());
+        jobManager.addInputFile(mockDataFile);
+        jobManager.setup(steeringResource);
+        jobManager.run();
+    }
+
+    private void createPlots() {
+        LCSimLoop loop = new LCSimLoop();
+        loop.add(new MockDataChallengeDiagnosticDriver());
+        loop.add(new CheckDriver());
+        AidaSaveDriver aidaSaveDriver = new AidaSaveDriver();
+        aidaSaveDriver.setOutputFileName(aidaFile.getAbsolutePath());
+        loop.add(aidaSaveDriver);        
+        try {
+            loop.setLCIORecordSource(reconFile);
+            loop.loop(-1);
+        } catch (IOException e) {
+            e.printStackTrace();
+        }
+    }
+
+    /*
+    private void checkPlots() {
+
+        IHistogram1D reconParticleCountPlot = aida.histogram1D("/" + reconstructedParticleCollectionName + "/Item Count");
+        System.out.println("reconParticleCount sumBinHeights = " + reconParticleCountPlot.sumBinHeights());
+        System.out.println("reconParticleCount mean = " + reconParticleCountPlot.mean());
+        System.out.println("reconParticleCount itemCount = " + computeItemCount(reconParticleCountPlot));
+
+        IHistogram1D trackCountPlot = aida.histogram1D("/" + trackCollectionName + "/Item Count");
+        System.out.println("trackCount Plot sumBinHeights = " + trackCountPlot.sumBinHeights());
+        System.out.println("trackCount itemCount = " + computeItemCount(trackCountPlot));
+        //assertEquals("Wrong number of tracks counted.", expectedTracks, computeItemCount(trackCountPlot));         
+    }
+     */
+    
+    /**
+     * Compute an item count based on a histogram with bins of size 1.
+     * @param histogram
+     * @return
+     */
+    /*
+    private int computeItemCount(IHistogram1D histogram) {
+        if (histogram.axis().binUpperEdge(0) - histogram.axis().binLowerEdge(0) != 1.0)
+            throw new IllegalArgumentException("The bins are the wrong size for this method.");
+        if (!histogram.title().equals("Item Count"))
+            throw new IllegalArgumentException("The histogram doesn't appear to contain item counts.");
+        int nbins = histogram.axis().bins();
+        double total = 0;
+        for (int i = 0; i < nbins; i++) {
+            total += histogram.binHeight(i) * histogram.axis().binLowerEdge(i);
+        }
+        if (total % 1 != 0)
+            throw new RuntimeException("Nonsensical number of items computed: " + total);
+        return (int)total;
+    }
+    */
+    
+    static class CheckDriver extends Driver {
+        
+        int ntracks;
+        int nparticles;
+        int nclusters;
+        int nevents;
+        
+        public void process(EventHeader event) {
+            ++nevents;
+            ntracks += event.get(Track.class, trackCollectionName).size(); 
+            nparticles += event.get(ReconstructedParticle.class, reconstructedParticleCollectionName).size();
+            nclusters += event.get(Cluster.class, clusterCollectionName).size();
+        }
+        
+        public void endOfData() {
+            System.out.println("CheckDriver got the following ...");
+            System.out.println("  nevents = " + nevents);
+            System.out.println("  ntracks = " + ntracks);
+            System.out.println("  nparticles = " + nparticles);
+            System.out.println("  nclusters = " + nclusters);
+            System.out.println("  <ntracks / nevents> = " + ((double)ntracks / (double)nevents));
+            System.out.println("  <nparticles / nevents> = " + ((double)nparticles / (double)nevents));
+            System.out.println("  <nclusters / nevents> = " + ((double)nclusters / (double)nevents));
+        }
+        
+    }
+}