Maybe it is obvious but I forgot to mention this is nothing to do with the server-side. If I copy the zip locally then it fails in the same way.
$ xrdcp RAW.21051586._000001.zip.1?xrdcl.unzip=data15_13TeV.00266904.debugrec_hlt.merge.RAW.g17._0001.1 .
[0B/0B][100%][==================================================][0B/s]
Run: [ERROR] Received corrupted data: ZIP Central Directory corrupted. (source)
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